Dictyostelium discoideum (cellular slime mold): DDB_G0287993
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Entry
DDB_G0287993 CDS
T00245
Symbol
vps60
Name
(RefSeq) SNF7 family protein
KO
K12198
charged multivesicular body protein 5
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
DDB_G0287993 (vps60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0287993 (vps60)
Membrane trafficking [BR:
ddi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
DDB_G0287993 (vps60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
DUF4665
DUF6119
DUF285
Hydantoinase_B
Pup
Motif
Other DBs
NCBI-GeneID:
8626402
NCBI-ProteinID:
XP_636927
dictyBase:
DDB_G0287993
UniProt:
Q54JK4
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All DBs
Position
5:complement(940480..941265)
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AA seq
215 aa
AA seq
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MKRFFGVSNNQPAPTLDEATKRIGGRMGQMDEKINGLNQELLAYDKQIKATRPGPAQNAI
KQKAIRVLQQKKMYERQRDQMASTSFNMEQTKFATESMRDTITTVSAMKQGAKDMKTQLK
HIKIEDVDDMQDEMQDLLDYNNEIQESLGRAYQTPDTLDESELEAELMSMGEELELEASM
PSYLMTPSVPTTDPHQSSVDEYGLPIGQEASQQVV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattttttggtgtttcaaacaaccaaccagccccaactttagatgaggcaaca
aaaagaattggtggaaggatgggacaaatggatgaaaaaataaatggattaaatcaagaa
ttattagcatatgataaacaaataaaagcaactagaccaggtccagcacagaatgcaatt
aaacaaaaagcaattagagtattacaacaaaagaaaatgtatgaaagacaaagagaccaa
atggcaagtacatcatttaatatggagcaaaccaagtttgccacagagtcaatgagagat
acaattacaacagtttcagcaatgaaacagggtgccaaagacatgaaaacacaattaaaa
catataaaaattgaagatgtagacgatatgcaagatgaaatgcaagatttattagattat
aacaatgaaattcaagaatcattaggtagagcttatcaaactccagatactttagatgaa
tcagagttggaggctgaattaatgtcaatgggtgaagaattagaattggaagcctcaatg
ccttcttatttaatgacaccatcagttccaactactgatccacatcaatcaagtgttgat
gaatatggtttacctataggccaagaagcatcacaacaagttgtttaa
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