Dictyostelium discoideum (cellular slime mold): DDB_G0288453
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Entry
DDB_G0288453 CDS
T00245
Name
(RefSeq) hypothetical protein
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DDB_G0288453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ddi04121
]
DDB_G0288453
Enzymes [BR:
ddi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DDB_G0288453
Ubiquitin system [BR:
ddi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
DDB_G0288453
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
DDB_G0288453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
zf-C3HC4_2
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
zf-C3HC4
Beta-prop_DCAF12
zf-C3HC4_3
Beta-prop_WDR90_POC16_2nd
zf-RING_UBOX
Beta-prop_WDR75_1st
zf-RING_2
zf-C3HC4_4
U-box
RING_XB3-XBAT31
zf-RING_5
zf-rbx1
zf-RING_6
WD40_RFWD3
zf-RING_10
Prok-RING_4
Beta-prop_WDR11_1st
WDR54
zf-Nse
Sina_RING
Motif
Other DBs
NCBI-GeneID:
8626624
NCBI-ProteinID:
XP_636746
dictyBase:
DDB_G0288453
UniProt:
Q54IY4
LinkDB
All DBs
Position
5:complement(1521809..1525011)
Genome browser
AA seq
970 aa
AA seq
DB search
METFNLMASSSTPTNTMVDSPGMATSSPISNGNSNHNHINFNNNNPDNPNNNNNNSNESI
EPPRISITTSSSSLLLYNTNIDMNENLENLNGSNSNSNSNGNNNNSNNPNNPNNNNSSIN
NSNNKVSTLNPKTYKIKKDSESNSDATEEVDELLLCPVCNDMIKEPFISKCGHSFCYQCI
IIHLSKSKTCPICMVYLTREQIFPNFALNKFVEKIGVKSSLLPTPTVKQFRNTLSNENLS
LHDINLMVSTLLEKKKNLEVHDQQVEYDILLDFLQKTRSQKMETFKQLKRQISYLENDIK
AIEHQKDISESLSNGDLDMLRDALFIGKGGDDSNIVLSIPHHSNNNNNNNNINPNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNNNNSSNNNNSNNNSSSNNNSNNNNNNNS
NNNNIPNNSSNVNNSNNNPNNNKILESSLNGINTATTTAATTTAATTTAATTTTTAATPT
TSTTTTTGATTTSATPTTTTTSTPTTTTTTTAATPPPSTTPSTTAATSSSISTTTTTTTN
NNNNSLISKKRRVEIHLDDLQSCYFSAYNESDYDSPTIISETNHNNNNILKSPNSVNSSS
SSIINSNSNSNNNNNTNSNLNNLNNNIESLKVGKGLLSFSRNLLKFTKYNEFKVLATLKY
GDLFNTSSIVSSIEFDRDEEYFATAGVTKKIKIFEFSQIRDNVEVHSPVKEMTCRSKISC
LSWNTYIKSQIASSDYEGIISLWDANTGQNIMTLEEHEKRVWSVDFSRTDPTQLASGSDD
TRVKLWSTTTERAITTIESKANICCVKFNPCSSNLIAFGSADHHIHYYDLRQYKDPLLIF
KGHRKAVSYVKFMNKDEIISASTDSTLKLWNVNQNDCVRTFTGHSNEKNFVGLTVNGDYI
CCGSENNGVYTYYKTLSKPIVTHRFGANSGTGEETDDDGSQFVSSVCWKKDSNILLAANS
QGNIKILSLV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattcaatttaatggcatcaagtagtacaccaacaaacacaatggttgattca
ccaggtatggcaacttcatcaccaatatcaaatggtaatagtaatcataatcatatcaat
ttcaataataataatccagataatccaaataataataataataatagtaatgaaagtata
gaaccacctaggatatctataacaacatcgtcatcatcattattgttatataatactaat
atagatatgaatgaaaatttagagaatttaaatggtagtaatagtaatagtaatagtaat
ggtaataataataattcaaataatccaaataatccaaataataataacagtagtattaac
aatagtaataacaaagtgtcaacattaaatccaaaaacatataaaattaaaaaagattca
gagtcaaactctgatgcgactgaagaagtagacgagttattattatgtccagtttgtaat
gatatgattaaagaaccattcatttcgaaatgtggtcattctttttgttatcaatgtatt
attattcatttatcaaaatcaaaaacttgtccaatttgtatggtgtatttaacaagagaa
caaatatttccaaattttgcattaaataaatttgttgaaaagattggagtaaagagtagt
ttattaccaacaccaacagttaagcaatttagaaatacattaagtaatgagaatttatca
ttacatgatataaatttaatggtatcaacattattggagaagaaaaagaatttagaggta
cacgatcaacaagttgaatatgatattctattggatttcctacaaaaaacaagatcacaa
aaaatggaaacttttaaacaattaaagagacaaatctcttatttagagaatgatattaaa
gcaattgaacatcaaaaagatatctctgaatcactttcgaatggtgatttagatatgtta
agggatgctttatttattggtaaaggtggtgatgattcaaatatagttttatcaatacca
catcatagtaataataataataataacaataatatcaatccaaataataataataataat
aataataataataataataataataataataataataataataataataataataataat
aataataataataataacaataataatatcaataataataataatagtagtaacaataat
aatagcaataataatagtagtagcaataataatagcaataataataataataataatagt
aataataacaatataccgaataatagtagtaatgtaaataatagtaataataacccgaat
aataataaaattttagaatcaagtttaaatggaataaatacggcaacgacaacagcagca
acgacaacagcagcaacgacaacagcagcaacgacaacaacaacagcagcaacaccaaca
acatcaacaacaacaacaacaggagcaacaactacatcagcaacaccaacaacaacaact
acttcgacaccaacaacaacaacaacaacaacagcagcaacaccaccaccatcaacaaca
ccatcaacaacagcagcaacctcatcttcaatatcaacaacaacaacaacaacaacaaat
aataataataattcattaataagtaagaaaagaagagttgaaatacatttagatgattta
caaagttgttatttttcagcatataatgaatcagattatgattcaccaacgataataagt
gaaactaaccataacaataataatatattaaagtcaccaaattcagttaattcatcatct
tcatcaataataaatagtaatagtaatagtaataataataataatacaaattcaaattta
aataatttaaataataatatagaatcattaaaagttggtaaaggattattaagtttttca
agaaatttattaaagtttacaaaatataatgaatttaaagttttagcaactttaaagtat
ggtgatttatttaatacatcatcaatcgttagtagtatagaatttgatagggatgaagaa
tattttgcgactgcaggcgttacaaagaaaatcaagatatttgaatttagtcaaattcgt
gacaatgtcgaggttcattcaccagttaaagagatgacttgtagatcaaagattagttgt
ttaagttggaatacctatataaaatcacaaattgccagtagtgattatgaaggtatcata
tccctatgggatgcaaatactggtcaaaacattatgacattggaagaacatgaaaagaga
gtttggagtgtagatttctcacgtactgatccaacacaattagcatcaggttccgatgat
acaagagtgaaactatggtcaacaacaactgaacgtgcaattacaacaatcgagagtaag
gcaaatatttgttgtgttaaattcaatccttgctcttcgaatttaattgcatttggttcg
gctgatcatcacattcactattatgatcttcgtcaatataaagatccattactcattttc
aagggtcatagaaaagcggttagttatgtcaaatttatgaataaggatgagattatatcc
gcctcaactgatagtactttgaaactatggaatgttaatcaaaatgattgcgttagaact
ttcactggtcattcaaatgaaaagaatttcgttggtctcaccgttaatggtgattacatt
tgctgtggcagtgaaaataatggtgtttacacatactacaaaactttatccaaaccaatt
gtcactcatagattcggtgcaaactctggtacaggtgaagaaactgatgatgatggttct
caattcgttagttcagtttgttggaaaaaagactcaaatattttattagctgcaaatagt
caaggtaatattaaaatattaagtttggtttaa
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