Dictyostelium discoideum (cellular slime mold): DDB_G0288471
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Entry
DDB_G0288471 CDS
T00245
Symbol
taf6
Name
(RefSeq) TATA-binding protein-associated-factor
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DDB_G0288471 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0288471 (taf6)
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0288471 (taf6)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
DDB_G0288471 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
DDB_G0288471 (taf6)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
DDB_G0288471 (taf6)
STAGA complex
DDB_G0288471 (taf6)
TFTC complex
DDB_G0288471 (taf6)
SAGA complex
DDB_G0288471 (taf6)
SLIK complex
DDB_G0288471 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
CBFD_NFYB_HMF
Histone
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
8626641
NCBI-ProteinID:
XP_636709
dictyBase:
DDB_G0288471
UniProt:
Q54IW7
LinkDB
All DBs
Position
5:complement(1566143..1567864)
Genome browser
AA seq
542 aa
AA seq
DB search
MSVLPNDTIKIIAESAGISNLPDEIAQQLASDVEYRIREIAQEAIKFMKHSKRDHLSTDD
INNALGLRNIEQLYGYSCSANDHSLLKFQKTTTTTQAIYFLNDKEMTFQEIASQPLPKVP
RDPSLSAHWLALEGVQPLIPQNPSPYEIEEHHKNLHKKFKSEKALQLEQQAQALLTQQNK
GNEKSGDNNNNNNNNGNNNNGNMIYGMAQLNGINTVLGGNNLQKQDPSIPGIHTLPSNTS
TIVKPTVKHVLSKEIQMFYEKITNSVKSDNQKLFDAALHSLKSDSSLHQLLPYFINFISV
QVTQNLTNLELLNRLMKMAQAILESKHLKPELYLHQLMPSILTCLVGKKLCNSPSENHWE
LRDFAARLVSFVCRKFGDVYSSLQGRITKTLVQTLHDTTKPLTTHYGAIVGLSGLGRNVI
QFLLLPYVPKYYKLLEPELNNNLSNPIKSMEANRVLNSIIDATGKFLIWVSEGENILSVL
DLKDDTTSKKQPISLPIITEFSRENILKTLKIQYQSLFDLFGEKLLAYIKPDNDSESMIL
IP
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttttaccaaatgatacaattaaaattatagcggaatcagcaggtatttcaaat
ttaccagatgaaatagcacaacaattagcatcggatgtagaatatagaattagagagatt
gcacaagaagcgattaaatttatgaaacattcaaaaagagatcacctttcaaccgatgat
ataaacaatgcattaggtttaagaaatattgagcaactctatggctatagttgtagtgcc
aatgatcacagtttattaaaatttcaaaaaaccacaacaacaacacaggccatctatttt
ttaaatgataaagagatgacatttcaagagattgcatcacaaccgttaccaaaggtacca
cgtgatccatcactttcagcacattggttagcattggaaggtgtgcaaccattgattcct
caaaatccatcaccctatgaaattgaagaacatcataaaaatttacataaaaaattcaag
agtgagaaagcacttcaattggaacaacaagcacaagcattattaacacaacaaaataaa
ggtaatgaaaaaagtggtgacaataataataataacaataacaatggtaacaataacaat
ggtaatatgatttatggtatggcacaattaaatggaattaatacagtattgggtggaaat
aatttacaaaaacaagatccatcaatacctggtatacatacattaccttcaaatacatca
accattgtcaaaccaaccgttaaacatgtattatcaaaagaaattcaaatgttttatgag
aaaatcacaaactctgtaaaaagtgataatcaaaaactatttgatgctgcattacatagt
ttaaagagtgatagtagtcttcatcaattattaccttattttataaattttatatcagtt
caagttactcaaaatttaacaaatttagaactattaaatagattaatgaaaatggctcaa
gcaatattagaaagtaaacatttaaaacctgaattatatttacatcaattaatgccatca
attttaacatgtttagttggtaagaaattatgtaattcaccatcagagaatcattgggaa
ttaagagatttcgcagcaagattggtatcatttgtttgtagaaaatttggagatgtatat
agttcattacaaggtagaataaccaaaacattagtacaaacattacatgatacaaccaaa
cctttaacaactcattatggtgcaatcgttggtttatcaggtttaggtagaaatgttata
caatttttattattaccttatgtaccaaaatattataaactcttggaaccagaattaaat
aataatttatcaaatccaataaaatcaatggaagccaatagagttttaaattcaatcata
gatgcaactggtaaattcttaatttgggtatcagaaggtgaaaatattctctcagtttta
gatttaaaagatgatacaacttcaaaaaagcaaccaatctctttaccaatcataacagag
ttttcacgtgaaaatattttaaaaactttaaaaattcaatatcaatcactttttgattta
tttggtgaaaaattattagcatatataaaaccagataatgattctgaatcaatgatttta
attccttaa
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