Dictyostelium discoideum (cellular slime mold): DDB_G0288659
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Entry
DDB_G0288659 CDS
T00245
Symbol
wdr18
Name
(RefSeq) WD40 repeat-containing protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0288659 (wdr18)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
DDB_G0288659 (wdr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_VPS8
WDR90_beta-prop_4th
WDR93
WDR54
Beta-prop_Nup120_160
YabA
PQQ_2
DUF2935
Beta-prop_KIB1-4
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
8626736
NCBI-ProteinID:
XP_636608
dictyBase:
DDB_G0288659
UniProt:
Q54IM3
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All DBs
Position
5:1790292..1792082
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AA seq
560 aa
AA seq
DB search
MGFVPKNKRVVKIKHVKLSDATTDEQQHKKNTTSLSNITSEVIAITSKEDSSLFIYDLRN
GNLIATFNNTNNDTNGFCTIGSEYFATSQANKAMINIYNWKKDQPIYKTPIQEKSGPICC
SSDGNYLVMGSASGMVYLWEVSTGTLLRMWEAHYNKISCITFTKDDFYIITAGDDGIINC
WSFEQCLDRDVSLLRARNSFSDHSLGITSIVCSFGGCNSRLFSVSLDRTCKIWDLVTGRC
INSIIFPTYLTSVCLDSTETTCYVGGGDGIIYQTDLIQLNPQSIQLLNINNNNNNNNNQN
KNNKNNSLAAQSFTNENEVGNKRKTFNGHTKAITSISLSMDGSLLISGSIDGNCNIWDTF
SRQIVRSIANTIKGSISSLSVLMNPIDSLNFNVNGTAENNKKASDPIAPFEKYSSNNIER
TSVPIKLKQIDDNGNIKITVSNLQSRIENTIVSNEQITNHTNLENNNKIIELNKTIQEYE
KEILQFKKQIQNLQDNNNTLKLTNDQLSKQFVLYKQQQQQPQQSQQQKSKPAKKPAKEIE
EKPVVATQETVSNKKQKTKK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgtaccaaaaaataaaagagttgttaaaattaaacatgttaaattaagtgat
gcaacaacagatgaacaacaacataaaaagaatacaacatcattatcaaatattacatca
gaggttattgcaattacatcaaaagaagatagttcattatttatttatgatttaagaaat
ggtaatttaatagcaacatttaataatacaaataatgataccaatggattttgtactatt
ggtagtgaatattttgcaactagtcaagctaataaagcaatgattaatatttacaattgg
aaaaaggatcaaccaatttacaagaccccaattcaagagaaatcaggcccaatctgttgt
tcatccgatggtaattatctagtgatgggtagtgcaagtggtatggtttatttatgggag
gtttcaaccggtaccctcttgagaatgtgggaggcccattataacaagatctcatgtatc
acattcaccaaagatgacttttacattataacggctggtgacgatggtataatcaattgt
tggagttttgaacaatgtttagatagagacgtcagtttattacgtgcacgtaattcattc
tctgaccattctttaggtatcacctccatcgtttgctcattcggtggttgtaacagtcgt
ttattctcagtatctttagatagaacttgtaaaatttgggaccttgtaactggtcgttgt
ataaattcaattattttcccaacttatttaacttcagtttgtttagactcaactgaaaca
acttgttatgttggtggtggtgatggtataatctatcaaactgatttaattcaattaaat
ccacaatcaattcaattattaaatataaataataataataataataataataatcaaaat
aaaaataataaaaataattcattggctgcacaatcatttacaaatgaaaatgaagttgga
aataagagaaaaacatttaatggtcatactaaagcaattacatcaatttcattatcaatg
gatggtagtttattaatttcaggttcaatcgatggtaattgtaatatatgggatactttc
tctcgtcaaatagttagatcaattgcaaatacaatcaaaggtagtatctcctcattaagt
gtattgatgaatccaatcgattctttaaatttcaatgttaatggtactgctgaaaataat
aaaaaagcctctgatccaatagctccatttgaaaaatactcttcaaataatattgaacgt
acaagtgtaccaattaaattaaagcaaatcgatgataatggaaatattaaaattacagtt
tcaaatttacaatctagaattgaaaatacaatagtttcaaatgaacaaattacaaatcat
acaaatttagaaaataataataaaattatagaattaaataaaactattcaagaatatgaa
aaagaaattttacaatttaaaaaacaaattcaaaatttacaagataataataatacactt
aaattaactaatgatcaattatcaaaacaattcgttttatataaacaacaacaacaacaa
ccacaacaatcacaacaacaaaaatcaaaaccagctaaaaaaccagcaaaagaaattgaa
gaaaaacctgttgttgctactcaagaaacagtttcaaataaaaaacaaaaaacaaagaaa
taa
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