Dictyostelium discoideum (cellular slime mold): DDB_G0289379
Help
Entry
DDB_G0289379 CDS
T00245
Symbol
syn1A
Name
(RefSeq) t-SNARE family protein
KO
K08486
syntaxin 1B/2/3
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
DDB_G0289379 (syn1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0289379 (syn1A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddi04147
]
DDB_G0289379 (syn1A)
Membrane trafficking [BR:
ddi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
DDB_G0289379 (syn1A)
Exosome [BR:
ddi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
DDB_G0289379 (syn1A)
Exosomal proteins of other body fluids (saliva and urine)
DDB_G0289379 (syn1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
OppC_N
DUF5345
VitD-bind_III
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
8627094
NCBI-ProteinID:
XP_636276
dictyBase:
DDB_G0289379
UniProt:
Q54HM5
LinkDB
All DBs
Position
5:complement(2678322..2679738)
Genome browser
AA seq
333 aa
AA seq
DB search
MEDRLQELRNAGGVKPEVDKKKKGKKGKGGEETPESPSEPSGSNYEDPSINDIELGPDDP
EASEEFMPEFYQEVGVLKTLMTSVKRSVRSIEDKYVLSLNSINVDQGSKYEDDIQQMLDG
TNKSFSELKKKLDTMKINNDKFAATKTATPTEVRIRSNMHNTLTQKFVEMMREYQEIQNN
YKNKYKEKIERQYKIVKPDATQEEIREAIDSGDSKKIFEETILYTHLHTQAKNALDYIQD
RHNDILKLEQSIAELHQLFLDMAILVETQGELLNQIEANVESTVLNTKEGVENLAEANRQ
HKKSRKKMYILLIIVAIVLVAILAPILSTQISK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcgtttacaagaattgagaaatgcaggtggtgttaaacctgaagtggataaa
aagaaaaaaggtaaaaagggaaaaggaggagaagaaacaccagagtctccatcagaacca
tcaggatcaaattatgaagatccatcaatcaacgatattgaattaggtccagatgatcca
gaagcatctgaagaatttatgccagaattttatcaagaagttggtgttttaaaaacttta
atgacatcagttaaaaggagtgtaagaagtatagaggacaaatatgttttatctttaaat
tcgattaatgttgatcaaggttcaaaatatgaagatgatatacaacaaatgctagatggt
acaaataaatcattctctgaattaaaaaagaaattagatacaatgaaaataaataacgat
aaatttgcagccacaaaaacagcaacaccaacagaagtacgtattagatcgaatatgcac
aatacattaacacaaaagtttgtggaaatgatgagagaatatcaagaaattcaaaataat
tataaaaataaatataaagaaaagattgaaagacaatataaaattgtaaaacccgatgca
acacaagaagagattagggaagctatagattcaggtgattctaaaaagattttcgaggaa
actattctttatacacatttacatacacaagcaaagaatgcattggattatattcaagat
agacataatgatattttgaaattggaacaaagtattgcagagttacatcaattgttttta
gatatggctattttggttgagactcaaggtgaattactcaatcaaatcgaagcaaacgtt
gaatccactgtattaaatactaaagaaggtgttgaaaatttagctgaagcaaatagacaa
cataaaaaatccagaaagaaaatgtatattcttttaattattgttgcaattgttttggtt
gcaattttagctccaatcctcagtactcaaatcagtaaataa
DBGET
integrated database retrieval system
