Dictyostelium discoideum (cellular slime mold): DDB_G0290331
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Entry
DDB_G0290331 CDS
T00245
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ddi03000
]
DDB_G0290331 (ssrp1)
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0290331 (ssrp1)
Transcription factors [BR:
ddi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
DDB_G0290331 (ssrp1)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
DDB_G0290331 (ssrp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
SpoIVA_C
Motif
Other DBs
NCBI-GeneID:
8627610
NCBI-ProteinID:
XP_635805
dictyBase:
DDB_G0290331
UniProt:
Q54G78
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Position
5:complement(3969916..3971699)
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AA seq
527 aa
AA seq
DB search
MSSSSNPVSQFNNISLGGRISGTRGILKFTTNNITWKSENGKIETVSSSDIKRANWARVT
PRIFQLILSIKGGATVKFDGFKEQDYEVVRKYLSDQYNVSPLEIIELSSKGCNWGEVKVN
GPMIQFTTDHGKVGFEFPISEVSQSVIGANNKNELTLEFHHDKAMDDDDETMVEMRFFTP
IRPSKEGEEGGKEKKVGEDGEEDEEDEEDAEKEEEISALEQFQQTIMNKSDMVSNVGKSL
VVFSAIQFLTPRGRIDIEMYPTFLKLHGKTHDYKVPYESISRLFQFFRPDQKHIFFIISL
DPPIRQGQTKYAHLVIQFQAEENIHLELNLTDELQQKFKDQLSPIMNGNANALICKILKA
LTGKKITIPGNFQSDSGANSIKCSLKANEGYLYPLERCFFFVHKPPTYIKFEDISNIEFA
RYGAPSVRGGSNRTFDLSINLKNSTSIQFVNIQREEYPSLFNFLKEKKLSILNPVTTGPA
MIIDDDDSDDDDYEPSESGSESDEGSASDESEEESEEDKKAKKKQKK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatcttcaaatccagtatcacaatttaataatatttcattaggtggtagaatt
agtggaactagaggtattttaaaatttacaacaaataatataacatggaaatcggagaat
ggtaaaattgaaacagtttcatcatcagatataaagagagcaaattgggctagagttaca
ccaagaatatttcaattaatattatcgattaaaggtggtgcaacagttaaatttgatgga
tttaaagaacaagattatgaagtagttagaaagtatttatcagatcaatataatgtatca
ccattggaaattatcgaattatcaagtaaaggttgtaattggggtgaggttaaagtcaat
ggaccaatgattcaatttaccactgatcatggtaaggttggatttgaatttccaatctct
gaagtatcacaatcggtcattggtgcaaacaataaaaatgaattaacattggaatttcat
catgataaagcaatggatgacgatgatgaaacaatggtagagatgcgttttttcacacca
attagaccatcgaaagagggtgaagaaggtggtaaagaaaagaaggtgggcgaggatggc
gaagaggatgaggaggatgaagaggatgcagaaaaggaggaggagattagtgcattggag
caattccaacaaaccattatgaataaatcagatatggtatcgaatgttggtaagagtttg
gttgtattctctgccattcaattccttacaccaagaggtcgtatcgatattgaaatgtat
ccaacattccttaaacttcatggtaaaactcatgactataaagtgccctatgagagtatt
tcacgtctctttcaattctttagaccagaccaaaaacatatctttttcatcatctccttg
gacccacccattcgtcaaggtcaaactaaatacgcccatttagtcattcaattccaagca
gaggagaacattcatctcgaattaaatctaaccgatgaacttcaacagaaattcaaagat
caactctcaccaattatgaatggtaatgccaatgcactcatttgtaagatccttaaagca
ttgactggcaagaaaatcacaattcctggtaatttccaatcggactcaggtgcaaactct
atcaaatgttcattgaaagccaatgaaggttatttatatccattggagagatgtttcttt
tttgttcataaaccaccaacctatattaaatttgaagatatctcaaacattgaatttgct
cgttatggtgcaccatccgttaggggtggtagtaatcgtacattcgatttatctatcaat
ctaaagaactcaacttccattcaatttgtaaatatccaacgtgaagaatatccaagtctt
ttcaatttccttaaagaaaagaaattatcaattttaaatccagttactactggtcctgca
atgataatagatgatgatgattctgatgatgatgattatgaaccttcagagtctggttct
gagtctgatgaaggttctgcttcagatgaatcagaggaagaatctgaagaagataaaaaa
gctaaaaagaaacaaaagaaataa
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