Dictyostelium discoideum (cellular slime mold): DDB_G0290929
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Entry
DDB_G0290929 CDS
T00245
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DDB_G0290929 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0290929 (gtf2b)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DDB_G0290929 (gtf2b)
Prokaryotic type
Archaeal type
TFB
DDB_G0290929 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_Tnp_ISL3
Sigma70_r4
RB_B
ORC6_2nd
BRF2-like_C_cyclin_rpt
HTH_23
Motif
Other DBs
NCBI-GeneID:
8627902
NCBI-ProteinID:
XP_635486
dictyBase:
DDB_G0290929
UniProt:
Q54FD6
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All DBs
Position
5:4767056..4768033
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AA seq
325 aa
AA seq
DB search
MLSAAPKPTPQNKKQSFYNKLWCMVCRIQDPDIIEDYAKGDLICRGCGVVVGDRIVDEHS
EWRTFSNSESTGADPNRVGGPINPLLRDSALSTTVGKGSKDSGTLTRLQNKSALGTGDRN
LLAAFKEIGRMADHMNLPQTVQDRANELFRFMDDKKSTKGRSVDGMVAAALYIACRQEHL
SRTFKEIAALTNVPKKEISRCYKIMKETFASVLNLQTISSEDFTSRFCSTLKLPNDVKKG
AEHVSKMAMDMGIVAGKSPISVTAASIYMVSQLSPEKRTQKQIADVSGVSEVTIRNAYKD
LYAKRDQLIPSDSPYFSQVQYLPTN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagctgctcctaaaccaactccacaaaataaaaaacaatcattttataataaa
ttatggtgtatggtttgtagaattcaagatccagatattattgaagattatgcaaaagga
gatttaatttgtagaggatgtggtgttgttgttggtgatcgtattgtagatgaacattcc
gaatggagaaccttttccaatagtgaaagtacaggagccgatccaaatcgtgttggtggt
ccaattaatcctttacttcgtgattcagcattgtctacaacagttggtaagggttcaaaa
gattcaggtacattaactcgtcttcaaaataagagtgctttgggtactggtgatcgtaat
ttgttagcagctttcaaagagattggtcgtatggccgatcatatgaaccttccacaaaca
gttcaagatcgtgccaatgaattgtttagatttatggatgataagaaatccaccaaaggt
agatctgtcgatggtatggtcgccgccgctttatatatagcctgtcgtcaagagcatctc
tcacgtacctttaaggagattgctgcgttgaccaatgttccaaagaaagagattagcaga
tgttataaaattatgaaagaaacctttgctagtgtattgaatcttcaaaccatctcctct
gaagatttcacaagtcgtttctgttcaactctcaaattaccaaatgacgtaaagaaaggc
gctgaacacgtcagtaaaatggccatggatatgggtattgttgcaggtaaatcaccaatc
tctgtaactgctgcctcaatctatatggtctctcaattatcacccgagaagagaactcaa
aaacaaatcgctgatgttagtggtgtatctgaggtaaccattagaaatgcttacaaagat
ctttacgctaaaagagatcaattaattccttccgactctccttatttcagtcaagttcaa
tatttaccaacaaattaa
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