Dictyostelium discoideum (cellular slime mold): DDB_G0291588
Help
Entry
DDB_G0291588 CDS
T00245
Symbol
ddx55
Name
(RefSeq) DEAD/DEAH box helicase
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0291588 (ddx55)
Enzymes [BR:
ddi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DDB_G0291588 (ddx55)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
Pre-60S particles
Helicases
DDB_G0291588 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
8628262
NCBI-ProteinID:
XP_635318
dictyBase:
DDB_G0291588
UniProt:
Q54EC2
LinkDB
All DBs
Position
6:complement(<577637..>579628)
Genome browser
AA seq
663 aa
AA seq
DB search
MTSKVDTGGWNKLENKLSDSTLNTINRLGFKSMSPVQSAVIPLFMSNKDVLVEACTGSGK
TLAFVIPIIEKILKRETNLKKTDIASIIISPTRELAIQIQQVLLEFLNDLNRIDDQNDLE
NIKTLEDELLEEQEEEENEKEEEEIEKKKKKKKIEISSLLLIGGTDIYQDLVNYKNYGGN
ILIGTPGRTDEFLTRVVRNDQQFKFKEFEMLILDEADRLLDMGFHLPINSILLKLPKQRR
TGLFSATQTSEVKELARTGMRNPFKVSVSVKHIETHEDQSIPTTLDNRYMIVPVEERLNQ
LVHFLLNHIDKNKIIIYFLTCSTVDYFFKILQSVKVLSGKPFFSLHGKAPHSQRIKVFDS
FSQATNGCLLSTDLAARGLDIPNVDWVLQYDSPQDPKAFVHRIGRTARMGRDGNALIFLS
PEEDSYIEFLKIKKVPLVEMVKAENVTNVLPEIKKISFNDREIMEKGVIAMVSHVRGYKE
HLCPYIFVFHRLNIGLLATGFGLLYLPRMPEIRDKTLIAEWTSGYTKDQILKIAYKEKKK
EKQRLEKVNKIKLKKEKDAKERQDAINEKKRKLEQQEADKLLQKQQPKQSSIEIQLKKQE
EKKKQEQESINEILHETQAFKKARKSKQQKKDKSSRFSDLMGSDTEQNNNEDEEDEEEED
EDN
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtaaagttgatacaggtggttggaataaacttgaaaataaattaagtgatagt
acattaaatacaattaatagattaggatttaaatcaatgtcgccagttcaatcagcagtt
ataccattatttatgtcaaataaagatgtattagttgaagcatgtacagggtcaggtaaa
acattagcatttgtaattccaattattgaaaaaattttaaaaagagaaaccaatctaaag
aaaacagatatagcatcaattattatttcaccaactcgtgaattagcaattcaaatccaa
caagttttattagaatttttaaatgatttaaatagaattgatgaccaaaatgatttagaa
aatattaaaactttagaagatgaattattagaagaacaagaagaagaagaaaatgaaaaa
gaagaagaagaaattgaaaaaaaaaaaaaaaaaaaaaaaattgaaatttcaagtttatta
ttaattggtggtacagatatttatcaagatttagttaattataaaaattatggtggtaat
attttaattggtacaccaggtagaactgatgaatttttaacaagagttgtaaggaatgat
caacaatttaaatttaaagaatttgaaatgttaattttagatgaagcagatagattattg
gatatgggttttcatttaccaattaattcaattttattgaaattaccaaaacaacgtaga
actggattattttcagcaactcaaacatcggaagttaaagaattggcaagaactggtatg
cgtaatccattcaaagtttcagtatcagttaaacatattgaaactcatgaagatcaatca
attccaaccacattggataatagatatatgattgtacctgttgaagagagattgaatcaa
ttggttcactttttattaaatcatattgataagaataaaattataatttatttcctaact
tgttcaactgttgattatttctttaagatacttcaatcggttaaagtattgagtgggaaa
ccattcttttcattacatggtaaagcaccacacagtcaacgtattaaagttttcgattca
ttctctcaagctaccaatggttgtttattatcaactgatttggctgctcgtggtttagat
attccaaatgttgattgggtacttcaatatgattctccacaagatccaaaagcatttgtt
catcgtattggtagaactgctcgtatgggtcgtgatggtaatgctttgattttcctttca
ccagaagaagattcctatattgaatttttaaaaattaaaaaagtaccattggtagagatg
gtgaaagctgaaaacgttacaaacgtcctaccagaaattaaaaaaatatcattcaacgat
cgtgaaattatggaaaagggtgtaattgcaatggtatcgcatgtacgtggttataaagaa
catctttgtccttatatatttgtatttcatcgtttaaatattggtttattagcaacaggt
tttggtttactttacttaccaagaatgcctgaaattcgtgataaaactttaattgcagag
tggacaagtggttatacaaaagatcaaatcttaaaaatcgcctataaagaaaagaaaaaa
gaaaaacaaagattagaaaaagttaataaaattaaattaaaaaaagaaaaagatgcaaaa
gaaagacaagatgcaattaatgaaaaaaaaagaaaattagaacaacaagaagctgataaa
ttattacaaaaacaacaaccaaaacaatcttcaattgaaattcaattaaaaaaacaagaa
gaaaagaaaaaacaagaacaagaatcaattaatgaaattttacatgaaactcaagctttt
aaaaaagctagaaaatcaaaacaacaaaaaaaagataaatcttcaagattttctgattta
atgggtagtgatactgaacaaaataataatgaagatgaagaagatgaagaagaggaagat
gaagataactaa
DBGET
integrated database retrieval system
