Dictyostelium discoideum (cellular slime mold): DDB_G0291752
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Entry
DDB_G0291752 CDS
T00245
Symbol
smc1
Name
(RefSeq) structural maintenance of chromosome protein
KO
K06636
structural maintenance of chromosome 1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0291752 (smc1)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
DDB_G0291752 (smc1)
Meiosis-specific proteins
Cohesin complex and associated proteins
DDB_G0291752 (smc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
Antig_Caf1
Motif
Other DBs
NCBI-GeneID:
8628307
NCBI-ProteinID:
XP_629977
dictyBase:
DDB_G0291752
UniProt:
Q54E85
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All DBs
Position
6:688164..692478
Genome browser
AA seq
1373 aa
AA seq
DB search
MGISILKIQNFKSYKGNPLIGPFKDFSCVIGPNGRGKSNIMDAIIFVLGHNSSQIRSTKL
NELVNTHIVTDKNNNEGGDNSTYVAINFNHQGNNYRFSRKIIGNGSQYFFEQTQVSAEQY
QKHLKDIGIDIGTKNFFVFQGDVESIATQNPKQISAFIDDISGSRALKFEYDRLLGEKSK
CEDDVFASYAKRKTIAFEKEQYKEQWTEVKEYQSMQDRVDSLKTDQQLAKLYQTTKEMRK
EQKLLDESKQQIQSIQSDEMKPLEQQYTQTSKNQASLHKEVVQLEDDISRLIKGKKKKGS
DQYSAEEEIKYISEKIKKTKLILSKAENSRSKQIQEIDQLRNELNEFTEQLENLDDEKEV
AETGLSIKMDHQQIEEYNQLKLQSGKETSGLKIKYDQLSREHKIEQDQHQQLTYRLEEFE
TMKKKFQESKEKFQNQKDIEQSNFQDLEQKLKESEKELVQCTTRFNETQQRQQNLNNDLE
RIQYSLSDLKSLKSESQRDRQFNQTVETLKSIFPGVKGKLMDLCEPSQRKYATALTLTMG
KLMDAIIVDTEETLIGCVRYLKEQLLGVATFISLDRLQMVKPINQQLRQISGGGGGSTAK
LLFDCLKIQKGIEDAVLYALGNTVVCESLAEAKLLAFGGKDRVKVITIQGIRITKSGLMS
GGGLSSIKSKSSQWDTKRVEELKKQRDTILAELSDVIQLNEIFNQRQQLTSQVHQLKSDY
SLSKSKIELLNDRLKKNQQELETNEKVINETIIPELSELNETLAKRKTQLDQLQSEINSI
EERYFSGFSKKFGVDNIREYEDNRLAKIQENIQKRLSLTESISVIQSRLDYEQGREIDNE
IKQLSEELNANEKILDQELEHKKENDEKEKQFKENLSDLQKQHTEKKSQLDKMNITIKDL
KKQLSTFNNQITDIEKLSNRHDFNITKLRGVYHQILIETRNEDIRLPILQFKGKEIDQGN
NNNNNNNNNNNNNNNNNNDKSEGETEDNNKKQKNKDSEAEVDESAVSEGENVKKPKKPTI
KKKKSSIKRKRETNKGDQEDNQEEDEEDEDDIFNESDVEENEKPNILQDIIKDITQAMVQ
DDILDIYEDEASIKFNYSSLKKRVFVDQKTYEEYLRKLTIDIETIGKEMKRVMPNYKAYE
HLVDVSDKLKKVRKELNQARDNAKTKIDSFNRVRDQRKQLFLRAFKRIAKNLTSIYSELT
RELEPPYHRGSAHLALEDTENPFNSGVRFTVIPPNKRFQEMDQLSGGEKSVAALAFLFST
HGLKSTPFMILDEIDAAFDSVNVLKLVRYVRHKASKDLQFLVISLKEQFFVHSDLLVGVC
REPDSQSKSFHLLLEEFPESDEAKKALISKGDDETETDGKTSATSGSSESEND
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgggtatatcaattttaaaaattcaaaattttaaatcatataaaggtaatccccttatt
ggtccattcaaggatttttcatgtgtaattggtcccaatggtaggggaaaatcaaatatt
atggatgctatcatctttgtattaggccataactcttctcaaattagaagtacaaaatta
aatgaattagttaatacacatattgtaacagataaaaataataatgaaggtggtgataat
tcgacttatgttgcaattaattttaatcatcaaggtaacaattatagattttcaagaaaa
attattggtaatggatcacaatatttttttgaacaaactcaagtttcagcagaacaatat
caaaaacatttaaaagatattggtattgatattggtacaaagaatttctttgtatttcaa
ggtgatgttgagagtatagctacacaaaatccaaagcaaatttcagcatttattgatgat
atctctggtagtagagcattgaaatttgagtatgatagattattgggtgaaaagtctaaa
tgtgaagatgacgttttcgcatcatacgctaaaagaaaaacgatagcattcgagaaggag
caatacaaggagcagtggaccgaggtgaaagagtaccaatccatgcaggaccgagtggac
tctttgaaaactgatcaacaattagctaaactttatcaaaccaccaaagagatgagaaag
gagcaaaaactattagacgaaagtaaacaacaaatccaatctatccaatcggatgaaatg
aagccattggaacaacaatacacacagactagtaagaaccaggcgtcattgcataaagag
gtggtgcaattggaggatgatatctcgaggttgataaagggcaagaagaagaaaggctcc
gatcagtattctgccgaagaggaaattaagtatatttcagagaaaatcaagaaaaccaaa
ttaatcctatcaaaagctgaaaacagtcgtagtaaacaaatacaagagattgatcaactt
cgtaatgaattaaatgagtttactgaacaattggagaatctagatgacgaaaaggaggtg
gcagaaactgggctatcaataaagatggaccatcaacaaattgaagaatacaatcaattg
aaattgcaatcaggtaaggaaacctctggtttaaagattaaatatgaccaactatcgaga
gagcacaaaattgaacaggaccaacaccaacaactcacctatagattggaggagtttgaa
actatgaaaaagaaattccaagaatctaaagagaaatttcaaaatcaaaaagatattgaa
caatcgaatttccaagatttagaacagaaattaaaagagtcagagaaagaactcgtacaa
tgtaccactagattcaatgagacacaacaacgtcaacaaaatttaaataatgatttagag
cgtattcaatatagtctttccgatttgaaatcattgaaatctgaaagtcaacgtgataga
caattcaatcaaaccgttgaaactttgaaaagtattttcccaggtgttaaaggtaaacta
atggatttatgcgaaccttcacaacgtaaatatgcaaccgcattgactctaacaatgggc
aaactaatggatgccatcatcgttgacactgaagagactctaattggttgtgtacgttat
ttaaaggagcaattacttggtgttgcaacatttataagtttagatcgtttacaaatggtt
aaaccaattaatcaacagttacgtcaaattagtggtggtggtggtggtagtacagctaaa
ttattattcgattgtttaaagattcaaaaaggtatagaagatgctgtattgtatgcattg
ggtaatacagtggtttgtgaaagtttagcagaggcaaagttattggcatttggtggtaaa
gatcgtgtaaaggttataactatacaaggtattagaatcacaaaatcaggtttaatgagt
ggtggtggtttatcatcaattaaatccaaatcatcacaatgggatactaaacgtgttgaa
gaattaaagaaacaaagagacaccatattggcagaactatccgatgtaatccaattgaat
gagattttcaatcaacgccaacaattgacaagtcaagtacatcaattgaaatcggattat
tcattatcaaagagtaaaattgagttactcaatgatagattgaaaaagaatcaacaagaa
ttggaaaccaatgaaaaggtaatcaatgaaacaatcattcccgagttatcggaattgaat
gaaacattggcaaaacgtaaaactcaattagatcaactacaaagtgaaatcaattcaata
gaggagagatatttcagtggattctcaaagaaatttggtgttgacaatatcagagagtat
gaagataacaggttggctaaaattcaagaaaacattcaaaagagattatcattaactgaa
tcgatctctgtgattcaatcacgtttagactatgaacagggtagagagattgataatgaa
attaaacaactctctgaagaattgaatgcaaatgaaaagatattagatcaagaattggaa
cataagaaagagaatgatgaaaaagagaaacaattcaaagagaatctatccgatctacaa
aaacaacatactgaaaagaaatcacaattagataaaatgaatataaccattaaagatttg
aaaaaacaattatcaacttttaataatcaaatcactgatattgaaaaattaagtaatcgt
catgattttaatattacaaaacttcgtggtgtttatcatcaaattttaattgaaactaga
aatgaagatattcgtttaccaattttacaatttaaaggtaaagaaattgatcaaggtaat
aataataataataataataataataataataataataataataataataataatgataaa
tctgaaggtgaaactgaagataataataaaaaacaaaaaaataaagatagtgaagctgaa
gttgatgaaagtgctgtaagtgaaggtgaaaatgttaaaaaaccaaagaaaccaacaatt
aaaaagaaaaaatcatcaataaaaagaaaaagagaaacaaataaaggtgatcaagaagat
aatcaagaagaagatgaagaagatgaagatgatatatttaatgaatcagatgttgaagaa
aatgaaaaaccaaatattttacaagatataattaaagatataacacaagcaatggtacaa
gatgatattttagatatttatgaagatgaagcatcaattaaattcaattattcgtcattg
aaaaaacgtgtatttgttgatcaaaaaacttatgaagaatatcttagaaagttaacaatc
gatattgaaaccattggtaaagagatgaaaagagttatgccaaattataaagcctatgag
catttggttgatgttagtgataaattgaaaaaagttagaaaagagttaaaccaagctaga
gacaatgcaaaaacaaagatagactcattcaatcgtgttagagaccaaagaaaacaattg
tttttaagagcgttcaagaggattgcaaagaatctcacttcaatctattcagagttgaca
agagagttggaaccaccttatcataggggttcggctcatttggctttggaagacactgaa
aatcctttcaactctggtgtaaggttcactgttatcccaccaaataaaagattccaagag
atggatcaattgagtggtggtgagaaatcagtggctgctttggctttccttttctcaact
catggcttgaaatcaactccatttatgattctcgatgaaatagatgccgccttcgatagt
gtaaacgttttgaaattggtgcgttatgttagacataaagcaagtaaagatcttcaattc
ttggtaatctctttgaaagaacaattctttgtccactctgatcttttagttggtgtttgt
agagaaccagattcacaatcaaaatctttccatttacttttagaagaattccctgaatct
gatgaagcaaagaaagctttaatctcaaaaggtgacgatgaaactgaaactgatggtaaa
acttctgcaacttctggtagtagtgaaagtgaaaatgactaa
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