Dictyostelium discoideum (cellular slime mold): DDB_G0291868
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Entry
DDB_G0291868 CDS
T00245
Symbol
rfc2
Name
(RefSeq) replication factor C subunit
KO
K10755
replication factor C subunit 2/4
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03030
DNA replication
ddi03410
Base excision repair
ddi03420
Nucleotide excision repair
ddi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDB_G0291868 (rfc2)
03410 Base excision repair
DDB_G0291868 (rfc2)
03420 Nucleotide excision repair
DDB_G0291868 (rfc2)
03430 Mismatch repair
DDB_G0291868 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddi03032
]
DDB_G0291868 (rfc2)
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0291868 (rfc2)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0291868 (rfc2)
DNA replication proteins [BR:
ddi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
DDB_G0291868 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
DDB_G0291868 (rfc2)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
DDB_G0291868 (rfc2)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
DDB_G0291868 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
DDB_G0291868 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_16
AAA_22
nSTAND_NTPase5
AAA_5
Rad17
Viral_helicase1
RCF1-5-like_lid
AAA_lid_RFC1
AAA_11
nSTAND3
MCM
NTPase_1
AAA_assoc_2
Mg_chelatase
AAA_19
DNAX_ATPase_lid
AAA_2
AAA_18
RNA_helicase
ATPase_2
AAA_28
RuvB_N
AAA_3
AAA_24
IstB_IS21
AAA_7
AAA_30
bpMoxR
Motif
Other DBs
NCBI-GeneID:
8628373
NCBI-ProteinID:
XP_629875
dictyBase:
DDB_G0291868
UniProt:
Q54E21
LinkDB
All DBs
Position
6:<850606..>851622
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AA seq
338 aa
AA seq
DB search
MTTTTTTTTNTNTTNLDPLLPWVEKYRPILIKDIVGNEETVSRLESISKDGNLPNIIISG
PPGTGKTSSILCLARALLGANYKEAVYELNASDDRTLDVVRDKIKSFAMKKVTLPAGRHK
IIILDEVDSMTSGAQQALRRIMEIYSGTTRFAFACNQSTKIIEPIQSRCAVLRFTRLSDS
QILTRLREVVQIEKVPYTDDGLAAIIFTAEGDMRQALNNLQATHSGFGLINAENVTKVCD
QPHPLIIKQIIALCAKSDFKEAYPFLKKLWDDGYSSIDIISALFSITKSSNNIPEYQKLE
FLKEIGFCNLRATTGVNTLVQLTGLLSKLCLVSIKMKN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgacaactacaactacaactacaacaaatacaaatacaacaaatttagatccattattg
ccatgggttgaaaaatatagaccaatattaattaaagatatagttggtaatgaagaaaca
gttagtagattagagagtatatcaaaggatggtaatttaccaaatattataattagtgga
ccaccaggtacaggtaaaacatcgagtatattatgtttagcaagggcattgttgggggca
aattataaagaggcagtatatgaattgaatgcatccgatgatagaacattggatgttgtt
agagataagattaaatcatttgcaatgaaaaaggtgacattgccagctgggagacataaa
atcattatattggacgaggtggatagtatgacaagcggagcgcaacaagcgttaagaaga
attatggagatatacagtggtacaacccgttttgcattcgcttgtaaccaatccaccaaa
atcattgaacctattcaatcaagatgtgctgtgcttcgtttcacacgtttatcagactca
caaattttaacacgtcttagagaagttgtacaaattgaaaaagtaccatataccgacgac
ggtttggctgctatcattttcacagcagagggtgatatgcgtcaagctttaaataactta
caagcaactcattctggttttggtttaatcaatgctgaaaatgttacaaaagtatgtgac
caaccacatccactcatcattaaacaaatcattgcattatgtgctaaatccgatttcaaa
gaagcttatccatttttaaaaaaactttgggatgatggttattcctcaatcgatatcatc
tctgccctctttagtattacaaaatcttcaaataatataccggaatatcaaaaattagaa
ttcttaaaagaaattggtttttgtaatttacgtgctacaactggtgtaaatactttagtt
caattaactggtttactttcaaaactttgtttagtttcaattaaaatgaaaaattaa
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