Dictyostelium discoideum (cellular slime mold): DDB_G0292072
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Entry
DDB_G0292072 CDS
T00245
Symbol
fdfT
Name
(RefSeq) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi00100
Steroid biosynthesis
ddi01100
Metabolic pathways
ddi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
DDB_G0292072 (fdfT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ddi01006
]
DDB_G0292072 (fdfT)
Enzymes [BR:
ddi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
DDB_G0292072 (fdfT)
Prenyltransferases [BR:
ddi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DDB_G0292072 (fdfT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
8628492
NCBI-ProteinID:
XP_629811
dictyBase:
DDB_G0292072
UniProt:
Q54DR1
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Position
6:1153510..1154993
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AA seq
416 aa
AA seq
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MQYMKSLAHPDEFLSLLKIGYTESFKPKSQLKENLGNKEWCYELLNKTSRSFAFVINELE
PSLKDAICIFYLVLRGLDTIEDDTTVELNTKLPVLTSFSEGLYQPGYKVFGYGMNNDEKN
LVENFDKVVDVFLGLGDGYCTIIHDITRRMANGMSEFLQKSVVTLPEWDLYCHYVAGLVG
IGLSKIFHASGLESEWFATADDESNQMGLFLQKTNIIRDYLEDINEKRIFWPRDVWARYT
LHLENFKEAKYQIPALHCLNDLITNALSHALIALDYMSRLKNPQVINFCAIPQVMAIGTL
NACYNNYNVFTGVVKIRKGQRALIVDAIQSKGLTATYELFFKFANEMRHKVPPNDPSAKK
TIQHLESIEKLCIEKLGYRPSGFNDFISYDWMAVTSLAVSSAFLIARHGPNFFSKL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatatgaaatcacttgctcatccagatgaattcctttctttattaaagattggt
tacactgaatcatttaagccaaaatcacaattaaaagaaaatttaggtaataaagaatgg
tgttacgaattattaaataaaacatcaagaagttttgcttttgtaattaatgaattagaa
ccaagtttaaaggatgctatttgtattttttatttagtattaagaggattagatacaatt
gaagatgatacaacagttgaacttaatacaaaattaccagtattaacatcattttcagaa
ggattatatcaaccaggttataaggtatttggatatggtatgaataatgatgaaaagaat
ttagtagagaatttcgataaggtggttgatgtatttttgggattgggtgatggatattgt
actatcattcatgatattacacgtcgtatggcaaatggtatgtcagagtttctccaaaag
tctgttgtaacattaccagaatgggatctctattgtcactatgtcgcaggtcttgttggc
attggtcttagcaagatctttcatgctagtggtttagagagtgaatggttcgcaacagca
gatgatgaatccaaccaaatgggtttattcttacaaaaaactaatatcattcgtgactat
ttggaagacattaacgaaaagagaatcttttggccacgtgatgtttgggctcgttacaca
ttacatttggagaatttcaaagaggccaaataccaaattccagcactccactgtctcaat
gatttaatcaccaatgctctttcacatgctcttatcgctttggactacatgagtcgttta
aagaatccacaagttatcaatttctgtgctatcccacaagttatggccattggtactttg
aatgcttgttataacaattacaacgtcttcactggtgtagtcaaaattcgtaagggtcaa
agagcattgatcgtcgatgctattcaatccaagggtctcactgctacctatgagctcttc
tttaagtttgccaatgaaatgcgtcataaagttccaccaaatgatccatctgcaaagaaa
accattcaacatctcgaatcaattgaaaaactctgcatagagaaattaggttatagacct
tctggtttcaatgatttcatctcttatgattggatggctgttacttctttagctgtttct
tctgctttcttaattgctcgtcatggtccaaactttttttcgaaattataa
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