Dictyostelium discoideum (cellular slime mold): DDB_G0292130
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Entry
DDB_G0292130 CDS
T00245
Symbol
blm
Name
(RefSeq) ATP-dependent DNA helicase RecQ family protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03440
Homologous recombination
ddi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDB_G0292130 (blm)
03460 Fanconi anemia pathway
DDB_G0292130 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddi03032
]
DDB_G0292130 (blm)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0292130 (blm)
Enzymes [BR:
ddi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDB_G0292130 (blm)
DNA replication proteins [BR:
ddi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
DDB_G0292130 (blm)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
DDB_G0292130 (blm)
Bloom's syndrome complex (BTR)
DDB_G0292130 (blm)
FA (Fanconi anemia) pathway
DDB_G0292130 (blm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
Motif
Other DBs
NCBI-GeneID:
8628529
NCBI-ProteinID:
XP_629849
dictyBase:
DDB_G0292130
UniProt:
Q54DM3
LinkDB
All DBs
Position
6:1240457..1244236
Genome browser
AA seq
1259 aa
AA seq
DB search
MDKSNYNQLLSDFLDVSKANENTNIQTNNTNGGCGNNNNTTFDDCDEINEKSTIASTGCK
DIKNIFSGVVPKVTYLPPKITPISTPNVILNSPTHPTSPSNININTNTTNTNITNSKITT
TFMNTATTTTTNSNIKNEIDEDDNGFDDSLITKRRPIRKNSSLHLNDDDGDDDIVDTNNI
PPPPSSSKTTPTITPSLPTKKIPAIFHSPIVNKTTNNNNNYNNNNNNNTNSINSNIYNFV
NKNSSDLVKTIKSDLYDLGIKKKNLKNQKKGSSDDEKQRISDELQEIKKSKKELIKLLEN
ALNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNYNNISNNYSNSNNVVYNSNSTNNINNNS
NNSNNSNSTSPTFKSSTIVQPPKVTPNYTSDISLDDDNYYPNDIDEYTHHSTTTTTTTTS
KTNNDNNNNYDNDIIDLDEYDGFSGFDSGYENGTDSAMFDDEDVVVNEQKPTNNHFSTNS
FNNSNNNNNNVFSVANFNGDNSRFKGNFPWSQKIIDINRSMFGFHVFRENQREIINSTLE
GNDTFVLMPTGGGKSLCYQIPALYQKGLTIVISPLISLINDQVEFLETLGYPAAALSSAV
SSDAAIDVYKDIRSNSPKIRLLYLTPERVVKSDSLIEILANLDQKGLFSRIVIDEAHCVS
QWGHDFRPDYKELSILRRKFPKVPILALTATATERVRNDVIYNLSMRNPVCFKQSFNRPN
LIYQVLKKTKQVVDDMSKFIHSTYPDKSGIVYCISKYDCENVAKRLRELKISAAHYHAGL
ENDERAKVQANWQKGRIKVIVATIAFGMGINKADVRFVIHHSVPKSLEGYYQESGRAGRD
GGISHCLLYFSWADKLRNDLLIQNSFTSGQGSSHNTRETRDSLNKMVNYCENETDCRRQL
QLAYFGENFEKSGCKKTCDNCISTLETTRKDVTEESKNLVKTIKALGSDTSNLIIDIFKG
SKGKKVLEKCAQSGITNLHGIGKNWQKHEIERILHQLLRDNILKETISQNPYGGTYSHLS
VGSYADNLLRNQKNVTLSFRSTPAKKTVSAAKKKKSSKNNEDDEEEEDEVPTNFVIIQNK
TTKTDANLVARLEKLRQDLALIENIQETYIFSRDTIDDILRVKPKTIKELKGLTGLPSQK
IDRYGKSIIQAINDFLSDTPYSFDKSSFQKIPFNSTQTSSYFSKSSSNPPHVHTISDDSE
FDTDTTNFVIDNDTVDENENFDFEIDDNDYLDQPQQQQSNKRKQSSTSVTSTKSSRVKK
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagtaattataatcaacttttgtcagattttttggatgtatcaaaagcgaat
gaaaatacgaatatacaaaccaataatacaaatggaggttgtggtaataacaacaacaca
acttttgatgattgtgatgaaattaatgaaaaatcaacaatagcttcaactggttgtaaa
gatattaaaaatatattttcaggtgtggtgccaaaggtaacttatttacctcctaaaata
actccaatatcaacaccaaatgttattttaaattcacctacacatcctacatcaccttca
aatataaatataaatacaaacacaacaaatacaaatataacaaactcaaaaataacgact
acatttatgaatacagctacaactacaactacaaattcaaatataaaaaatgaaattgat
gaagatgataatgggtttgatgattcattaataacaaaaagaagaccgattagaaaaaac
tcatctttacatttaaatgacgatgatggtgatgatgatatagttgatactaataatata
ccaccaccaccatcatcatcaaagacaacaccaaccataacaccttcattaccaaccaaa
aagattccagcaatatttcactcaccaattgtaaataaaacaacaaataataataacaat
tataataataataataataataatacaaacagtattaacagtaatatatataattttgta
aataaaaactcttcagatttggttaaaactattaaatcagatttatatgatttgggaata
aagaaaaagaatttgaaaaatcaaaaaaaaggttcatcggatgatgagaaacaaagaata
tctgatgaactccaagaaatcaaaaaatcaaaaaaagaattaattaaattacttgaaaac
gctttaaataataataataataataataataataataataataataataataataataat
aataataataataataataataatagtagtaataattataataatattagtaataattat
agtaacagcaataatgtagtatataatagtaactcgacgaataatattaataataatagt
aataatagtaataatagtaattcaacatcaccaacatttaagagtagtacaatcgttcaa
cctccaaaagtaacaccaaactatacatctgatatatcacttgatgatgataattattat
ccaaatgatatcgatgaatatacacatcactcaacaacgacaacgacaacaacaacatca
aaaactaataatgataataataataattatgataatgatataattgatttagatgaatat
gatggttttagtggttttgatagtgggtacgaaaatggaaccgatagtgcaatgtttgat
gatgaagatgttgtagttaatgaacaaaaacctacaaacaatcacttttcaacaaactct
tttaataatagtaataataataataataatgttttttcagttgcaaactttaatggtgat
aatagtagatttaaaggtaatttcccatggagtcaaaagattatagatataaatagatca
atgtttggttttcatgtttttagagagaatcaaagggaaattattaattcaacattggaa
ggaaatgatacatttgtgttaatgccaactggtggtggtaaaagtttatgttatcaaata
ccagcactttatcaaaagggacttaccattgtaatttcaccattgatttcattgattaat
gatcaagtggaatttttagagacattgggataccctgccgctgcattaagtagtgcggtt
tcatcagatgcagccattgatgtctacaaagatattagatcaaattcaccaaagattcgt
ttactatatttaacacctgaaagagttgtaaagagtgattcactcatagagatattggcc
aatctagatcaaaagggtttattctcaagaattgtaattgatgaagcacattgtgtatcg
caatggggtcacgattttcgtccagattataaagaactctcaatattaagaaggaaattc
ccaaaggtaccaatacttgcattgacagcaacagctacagaaagagttagaaatgatgtt
atctacaatcttagtatgagaaatccagtttgtttcaaacaaagtttcaatagacccaat
ttaatttatcaagttttaaagaaaaccaaacaagtggttgatgacatgtccaagtttatt
cattcaacttatcctgataaatctggtatcgtctattgtatttcaaagtatgattgtgag
aatgttgcaaagagattaagagaattgaaaattagtgcagcccattatcatgcgggttta
gagaatgatgaaagagctaaagttcaagctaattggcaaaagggtagaattaaggttatt
gttgcaaccattgcatttggtatgggtattaacaaagctgacgttagatttgtcattcat
cattcagttcctaaatcattggaaggttactatcaagagagtggtagagctggtcgtgat
ggtggtatttctcattgcttattatacttttcgtgggctgataaattaagaaacgatctc
ttgattcaaaatagttttacaagtggtcaaggtagttcccacaatactagagaaactaga
gacagtttgaataaaatggtaaactattgcgagaatgaaaccgattgcagacgtcaatta
caattggcttactttggtgaaaattttgaaaagagtggatgtaaaaaaacctgtgataat
tgtataagcactttggaaaccactagaaaggatgtcactgaagaatcgaaaaatcttgta
aaaaccatcaaagcattgggttcagatacatcaaatttaatcattgacattttcaagggt
tcaaaaggtaaaaaggttttagaaaagtgtgcacaatctggaattaccaatttacatggc
attggtaagaattggcaaaaacatgaaattgaaagaatattacatcaattacttagagat
aatattctaaaggaaactattagtcaaaatccttatggtggaacttattctcatttatca
gtggggagttatgctgataatttactaagaaatcaaaagaatgtaacactatcatttaga
tcaacacctgccaaaaaaactgtatcagccgccaaaaagaagaaatcaagtaaaaataat
gaagatgatgaagaagaagaagatgaagtcccaactaatttcgttataattcaaaataaa
accactaaaaccgatgctaatcttgttgctcgtttggaaaaacttcgtcaagatcttgct
ttaattgaaaatatccaagaaacctatatcttctcacgtgatactatcgatgatattctt
agagttaaaccaaaaactattaaagaattaaaaggtcttacaggtcttccatctcaaaaa
attgatagatatggtaaatctatcattcaagccattaatgattttctctctgatacacct
tattcatttgataaaagtagttttcaaaaaataccatttaattcaactcaaacttcatct
tatttttcaaagtctagtagtaatccaccacatgttcacactataagtgatgactctgaa
tttgatactgatacaactaatttcgttattgacaatgatactgttgatgaaaatgaaaat
tttgactttgaaattgatgacaatgattatttagatcaaccacaacaacaacaatcaaat
aaaagaaaacaatcatcaacatctgtaacctcaacgaaatcaagtagagttaaaaaataa
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