KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0292244
Entry
DDB_G0292244      CDS       T00245                                 
Symbol
rpb3
Name
(RefSeq) RNA polymerase II core subunit
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03020  RNA polymerase
ddi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DDB_G0292244 (rpb3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    DDB_G0292244 (rpb3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ddi03021]
    DDB_G0292244 (rpb3)
   03400 DNA repair and recombination proteins [BR:ddi03400]
    DDB_G0292244 (rpb3)
Transcription machinery [BR:ddi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     DDB_G0292244 (rpb3)
DNA repair and recombination proteins [BR:ddi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DDB_G0292244 (rpb3)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L Herpes_U44
Other DBs
NCBI-GeneID: 8628579
NCBI-ProteinID: XP_629750
dictyBase: DDB_G0292244
UniProt: Q54DH7
LinkDB
Position
6:1368967..1370237
AA seq 302 aa
MSQTVSQLTRQPELEILEIKNDSIIFILSNTDISVANALRRVMIAEVPTMCIDLVEFESN
NSVLCDEFIAHRLGLIPLVSDNIDKFCYTRDCSCSDRCDQCSVELRLNVKCTENRPRDVT
SSDLLSQNSAVIPVSSQVTSSNSEQEIPIVKLRRGQEIKLRAIAKKGVGKEHAKWSPSCV
ATYQFQPIIVLNQNRIDELTDQQKEEWVGSCPTKVYSYSPHQSTQQVTIEDPLRCVYCLE
CKKKAESFGKPDLVHLEQKQDKFIFTVESSGALKPEDIVLYAIQIIKRKLTDIQGQMAEG
ML
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtcacaaacagtatcacaacttaccagacaaccagaattggaaattttagaaattaaa
aatgatagtataatattcattctttcaaatacagatatcagtgttgcaaatgcactaaga
agagttatgattgcagaagtaccaacaatgtgtatagatttagttgaatttgaatcgaat
aattctgtgctttgtgatgaatttatagcacatagattagggttaataccattagttagt
gataatatcgataaattttgttatacaagagattgcagttgttcagatagatgtgatcaa
tgtagtgttgaactaagattaaatgttaaatgtacagaaaatagaccacgtgatgttaca
agttcagatttattatcacaaaatagtgcagtaattcctgtatcttcacaagtaacaagt
tcaaatagtgaacaagaaattccaattgtaaaattaagaagaggacaagaaattaaatta
agagcaatcgctaaaaaaggtgtaggtaaagaacatgcaaaatggtcaccatcatgtgtt
gcaacatatcaatttcaaccaattattgtattaaatcaaaatagaatagatgaattaaca
gatcaacaaaaagaggaatgggttggaagttgtccaaccaaagtttacagttatagtcca
catcaatcaacacaacaagtaacaatcgaagatccattaagatgtgtttattgtttggaa
tgtaaaaagaaagcagaatcatttggtaaacctgatcttgtacatttagaacaaaaacaa
gataaattcatttttactgtagagagttcaggtgcattaaaaccagaagatattgtttta
tatgctattcaaattattaaacgtaaattaacagacattcaaggtcaaatggccgaagga
atgctttaa

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