Dictyostelium discoideum (cellular slime mold): DDB_G0293168
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Entry
DDB_G0293168 CDS
T00245
Symbol
ddx17
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0293168 (ddx17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0293168 (ddx17)
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0293168 (ddx17)
Enzymes [BR:
ddi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DDB_G0293168 (ddx17)
Spliceosome [BR:
ddi03041
]
Complex A
U1 snRNP components
U1 related factors
DDB_G0293168 (ddx17)
Complex B
DDB_G0293168 (ddx17)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
Pre-60S particles
Helicases
DDB_G0293168 (ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
8629001
NCBI-ProteinID:
XP_629279
dictyBase:
DDB_G0293168
UniProt:
Q54CE0
LinkDB
All DBs
Position
6:complement(2360817..2364250)
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AA seq
785 aa
AA seq
DB search
MSYNSSNSGSGRYDDNRSGNSSYSSTSRGGSSYGNRSGSDRDYNRDGGSYNRDSSRDYNS
SSGSGSGNGSSSYNKYPSSSSSSSSSSSTSSYGPSKGKDFQDSWGSSSTGTTNGYNGSSN
GYNSSSNGYNSSNSSSSYGASNNGYNNSSGSSSSGSSGSSNGGSYNNSGSSNSNGYSKPT
SNYSYSNGYTGPTTNYSSYSNGYSTPPTSTSTSSSSTTTTTTTTPSTSYNGGSTSYGYST
SGSSNGYGGYSQPPIPSYDPSSVSSYGAVTPASSSYNASVPGSSYGNSTYRSSGYGNQSY
ATTNSYGSSSYGSSGFYGNAKANTGSFGSALSPISWDLSKLPRFEKNFYLEHPDVSKFTQ
EEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALK
GRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVLAPTRELALQIQEETNKF
GGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEA
DRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITAN
HNVRQIVEVCQDFEKKERMLSFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIH
GNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRT
ARAGASGVSYSLLTTDNARLANELIKVLTEAKQKIPIELSNLSVTPSTSSNTKKFSPYPT
YSKRY
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtcatataatagtagtaatagcggtagtggtagatacgacgataatagaagtggtaac
tcatcatattctagtacctctagaggtggcagtagttatggtaatagatcgggaagtgat
agagattataaccgagatggtggaagttataatagggattcctctagagattataacagt
agtagtggtagtggtagtggtaatggcagtagtagctataataaatacccatcatcatca
tcatcatcatcctcatcctcatcaacttcatcatatggtccatcaaaaggtaaagatttc
caagattcatggggtagttccagcacaggaacaaccaatggatataatggttcaagtaac
ggatataatagttcaagtaatggatataatagtagtaatagtagctcaagttatggtgca
tcaaataatggatataataatagtagtggtagtagtagtagtggtagtagtggtagcagt
aatggcggcagttacaacaatagtggtagtagtaactcaaatggatatagtaaaccaaca
tcaaattatagttattcaaatggatacactggaccaaccacaaattatagtagttattca
aatgggtattcaacaccaccaacatcaacatcaacatcatcgtcatcgactactacaaca
acaacaacaacaccttcaacatcttataatggtggtagtacaagttatggttattcaaca
agtggtagttctaatggatatggtggatattcacaaccacccattccatcatatgaccca
tcaagtgtttcaagttatggtgcagtgactcccgcttcttcaagttataatgcatcagta
ccaggtagttcctacggaaattcaacctatcgttcctcaggctacggtaaccaatcttat
gcaaccaccaatagttatggtagttcctcatatggttcatcaggattttatggcaatgcc
aaggcaaatactggtagctttggatccgccttatcacctatcagttgggacttgagtaaa
ttaccaagatttgaaaagaatttctatcttgagcatccagatgtatccaaatttacacaa
gaagagattgaaaagtttagagcatccttccaaatgaccgtaaaaggtagagaagttcca
ccaccaatcatgcaatttacccaagcaccattcccaggttacttgatgaaagagatcatt
ggtgcaggtttcccaaatccaacaccaattcaatcccaagcatggccaattgcattaaag
ggtagagatatcattggtttggctaaaactggttccggtaagacattggctttcctttta
ccatcaattgttcacattaatgcacaaccagtacttagagaagatgatggtccaatcgta
ttggtattggcaccaaccagagagttggcacttcaaattcaagaggaaaccaataaattt
ggtggaacaagtcaaatttcaaatacatgcgtctatggtggtgcaagtaaacacactcaa
gtcgctgcacttaaaaagggtgttgaaattgttattgccacacctggtcgtttaattgat
atcctcgagtctggtaaaaccaatcttcgtcgtgtcacctatttggtactcgatgaagcc
gatcgtatgctagatatgggtttcgaaccacaaattagaaaaatcattagccaaattcgt
ccagatcgtcaaacacttatgttctctgccacttggccaaaggaagttcaagcattggct
catgatttccttaccgatcatattcaagttcacattggttcaacagagatcactgcaaat
cataacgttagacaaatcgttgaggtttgtcaagactttgaaaagaaggaaagaatgtta
agttttttaggaagtgttggtcgtgatgaaaaagttattgtctttgccgaaactagaaaa
ggtgtcgatgatcttcaacgtgttttacaattttcaggtttcaaatcaattggtattcat
ggtaataaatctcaaccagaaagagattttgttttatctcaatttaaaaatggtatggtt
ccaattatgattgcaacagatgtagcttctcgtggtttagatatcaaggatattaaatat
gtagtaaactatgacttcccaaacacaatagaagtttatattcaccgtattggtcgtact
gctagagctggagcatccggtgtcagttattcattattaacaacagataatgcacgtttg
gctaacgaattaattaaagtattaactgaggcaaaacaaaaaataccaattgaactttca
aatctttccgttactccaagtacatcttcaaatacgaaaaaattttcaccatatccaact
tattcaaagagatattaa
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