Dictyostelium discoideum (cellular slime mold): DDB_G0293218
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Entry
DDB_G0293218 CDS
T00245
Symbol
vps35
Name
(RefSeq) vacuolar sorting protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
DDB_G0293218 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0293218 (vps35)
Membrane trafficking [BR:
ddi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
DDB_G0293218 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
CowN
Motif
Other DBs
NCBI-GeneID:
8629124
NCBI-ProteinID:
XP_629242
dictyBase:
DDB_G0293218
UniProt:
Q54C24
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All DBs
Position
6:2686279..2688810
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AA seq
781 aa
AA seq
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MMKKNKPTVAQTLSPEEEQAKFFEEAKNNVMIQGHHMKLSLDNSKLMDALKYASNIINEL
RTSLLSPKSYYALYLVAFDYLQYLNTYLYEEKHGKKMIELYEVVQHAGNVLPRLYLLITV
GSVYIKTKQAPAKDVLKDLIEMCRGVQHPTRGLFLRHYLSEVTKDKLPDIDSSVENGTVM
DSIDFIIQNFTETNKLWVRMQHQAPTKDRERRENERLELRLLVGKNLSRLAQLDGVDQKT
YSEVVLPKVVEQIINCKDKIAQQYLMEILIQVFPDEFHLATLDIILQTCAQLQSGVDVKT
IIASLIDRLANFATRNADLVPDNIKIFDIFFNNVKEIIQARPNMELQDILGLHVSLLNLT
LKCYPTNKDNANEVLGLCQSIIVNKAKEDINKPTCVKQIIQLLQIPLDVFKNVLVVLKLS
NYQPLISCLSYNNRKKVSLDIVNNTINNSTIIEEPEAVNNLLETIQTLIKDEQDQPDMDD
IDKEDFQEEQNKVASLIHLFDSEDPEKLFKIYIIARGHFGKGGPHRIRHTLVPLVFCSLR
FIRNFKQQVDSGVISLDENKWIAIGSKIFTFVSETIKALADIKLADLSFRLYLQALQTFD
HCGLVSRVKELAIKALLIFQEDIADFKAQVMALQLLISTLNSLSIPNEEIYESLAAQTIK
QASRLLLPQDQAKLISTCSHLFWVDNPSRQYQNPDSVLQALKKALSIISNESSPGLGTFV
DILNECLFYCDKETDAVPIQFVSDLVELIRTTHVKEADPALPYLQNTIKYIQSQNYKGIS
I
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaaaataaaccaacagtagcacaaactttatcaccagaagaagaacaagca
aaattctttgaagaagctaaaaacaatgttatgattcaaggtcatcacatgaaattatct
ttggataactcaaaattaatggatgcactcaagtatgcctcaaacattatcaatgaactc
cgtacaagtttactttcaccaaaatcatattatgctctctatttagttgcttttgattat
cttcaatacttgaatacttatctctatgaagagaaacatggtaagaaaatgattgaactt
tatgaagttgtacaacatgctggtaatgttttaccaagattatatttattaattacagtt
ggatcagtttatattaaaactaaacaagcaccagcaaaagatgtattaaaagatttaatt
gaaatgtgtagaggtgttcaacatccaacaagaggtttatttttaagacattatcttagt
gaagttaccaaagataaattaccagatattgattcatccgttgagaatggtacagttatg
gattcaattgatttcatcattcaaaatttcacagagactaataaactttgggtacgtatg
caacatcaagctccaaccaaagatagagagagaagagagaatgaacgtttagagttaaga
ttattggtcggtaagaatttatcacgtttagcacaactcgatggtgttgatcaaaaaaca
tatagtgaagtggttttaccaaaggtcgtagaacaaatcatcaattgtaaggataaaatc
gctcaacaatatttaatggaaatcttaattcaagtattcccagatgaatttcatttggct
acactcgatattattcttcaaacttgtgctcaacttcaatctggtgttgatgttaaaact
atcattgcttcactcattgatagacttgctaactttgcaactcgtaatgctgatcttgtt
ccagataatattaaaattttcgatatctttttcaataatgttaaagaaattattcaagca
agaccaaatatggaattacaagatattttaggattacatgtatctttattaaatttaaca
cttaaatgttatccaactaataaagataatgctaatgaagtattaggattatgtcaatca
attattgttaataaggccaaagaagatattaacaaaccaacatgtgttaaacaaatcatt
caattattacaaattccattggatgtattcaagaatgtattggttgtattgaaattgagt
aactatcaaccattgatttcatgtttatcatataacaatagaaagaaggtttcattggat
attgtaaacaataccatcaacaatagtacaatcattgaagagccagaagcagttaacaat
ctcttggagaccattcaaaccttgatcaaggatgaacaagatcaaccagatatggatgac
atcgataaggaagacttccaagaggaacaaaataaagtcgcctcactcattcatctcttt
gatagcgaagatccagagaaactattcaagatttacattattgctcgtggtcactttggt
aaaggtggtccacatcgtattagacatactttggttccattggtattctgttctcttcgt
ttcattcgtaactttaaacaacaagtcgatagtggtgtcatcagtttggatgaaaataaa
tggattgcaattggttcaaagattttcacctttgtcagtgaaaccatcaaagctttggcc
gatatcaaattggccgatcttagctttagattataccttcaagcactccaaacctttgac
cactgtggtttggtctctcgtgtcaaagaattggccatcaaggctctcttaatcttccaa
gaagatatcgccgatttcaaagctcaagttatggcccttcaattgttaatctctactctc
aatagtttaagcattccaaatgaagagatctatgaatccttggccgcccaaaccattaaa
caagcttctcgtcttctcttaccacaagatcaagcaaaactcatctctacttgttcacat
ttattctgggttgataatccttctcgtcaatatcaaaatccagactctgtattacaagct
ctcaaaaaagctctctccattatcagtaatgaatcgagtcctggtcttggtacatttgtt
gacattttgaatgaatgtctcttctattgtgataaagaaactgatgctgttccaattcaa
ttcgtttcagatttggttgaattaattcgtactactcatgttaaagaagctgatccagca
ttaccatatttacaaaatactatcaaatacattcaatctcaaaattataaaggtatttca
atttaa
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