Dictyostelium discoideum (cellular slime mold): DDB_G0293226
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Entry
DDB_G0293226 CDS
T00245
Symbol
rvb1
Name
(RefSeq) AAA ATPase domain-containing protein
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DDB_G0293226 (rvb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0293226 (rvb1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ddi03037
]
DDB_G0293226 (rvb1)
Enzymes [BR:
ddi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDB_G0293226 (rvb1)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
DDB_G0293226 (rvb1)
Chromatin remodeling factors
SRCAP complex
DDB_G0293226 (rvb1)
INO80 complex
DDB_G0293226 (rvb1)
INO80 complex (yeast)
DDB_G0293226 (rvb1)
SWR1 complex
DDB_G0293226 (rvb1)
ASTRA complex
DDB_G0293226 (rvb1)
Cilium and associated proteins [BR:
ddi03037
]
Motile cilia and associated proteins
Dynein assembly factors
DDB_G0293226 (rvb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_19
Cdc6_lid
Mg_chelatase
AAA_18
bpMoxR
AAA_25
DnaB_C
AAA_28
IstB_IS21
Zeta_toxin
ResIII
nSTAND3
TsaE
NPHP3_N
Rad17
AAA_7
NAM-associated
Motif
Other DBs
NCBI-GeneID:
8629120
NCBI-ProteinID:
XP_629238
dictyBase:
DDB_G0293226
UniProt:
Q54C28
LinkDB
All DBs
Position
6:complement(2678243..2679944)
Genome browser
AA seq
523 aa
AA seq
DB search
MSENNTDTVMGDSNPSTKITETPMNETPSSTTTTTATTTTTATTPPQQTQQPPQPQLSTT
VTETTPTTRIEEIKSVKSQRVATHSHIKGLGLLENGTASNIADGLVGQCKAREAAGIVTE
LIKSKKMAGKALLLAGPPGTGKTALALAISQELGTKVPFCPMVGSEVYSSEVKKTEILME
NFRRSIGLRVKEIKEVYEGEVTEITPEETDNPLGGYGKTIAHVVIGLKTTKGTKQLKLDP
TIYESIQKEKITVGDVIYIEANSGSVKRVGRSDFYATEHDLEAEEYVPLPKGEVFKKKDI
IQDVTLHDLDLANAKPQGGQDIMSMMGQMMKPKKTEITEKLRLEINKIVNRYIEQGVAEL
VPGVLFIDEVHMLDIECFSYLNRALESTLAPIVVFATNRGNCVIKGTDNDIQSPHGIPVD
LLDRLMIIRTLPYNYNEIVQILTIRASIENHKIDDEALMYLAEIGNTASLRYAIQLLTPA
SILSKTYSRPSITKEDIEEVTSLFNDAKTSAKLLEQNKSKYLY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaataatacagatacagttatgggtgattcaaatccatcaactaaaattaca
gaaacaccaatgaatgagacaccatcatctaccaccaccaccaccgcaactactacaact
acagccacaacaccaccacaacaaactcaacaaccaccacaaccacaactttcaaccaca
gtaacagaaaccacaccaaccactagaatagaagaaattaaatcagttaaatcacaaaga
gttgcaacacatagtcatattaaaggtttaggtttattagaaaatggtacagcttcaaat
attgcagatggtttagtaggccaatgtaaagcaagagaagcagcaggtattgttacagaa
ttaattaaatcaaaaaaaatggcaggtaaagcattattattagcaggaccaccaggtaca
ggtaaaacagcattagcattagcaatttcacaagagttaggtacaaaagtaccattttgt
ccaatggtaggatcagaggtatattcatcagaagttaaaaagacagagatattgatggag
aattttagacgttcaattggattgagagttaaagagattaaagaggtttatgagggtgaa
gttacagagataacaccagaggaaacagataatccattgggtggttatggaaagactata
gcacatgttgtaattggattaaagacaaccaaaggtacaaaacagttgaaattggatcca
accatctacgaatccattcaaaaggagaagatcacagtaggagatgtaatctacatcgag
gccaacagtggatcagtaaagagagtcggtcgttcagatttctatgcgaccgagcatgat
ttagaggcagaggaatacgtgccattaccaaagggtgaggtattcaaaaagaaagatatc
attcaagatgtaaccctccacgatttagatttagcaaatgcaaagccacaaggtggtcag
gatatcatgtcgatgatgggtcaaatgatgaaacccaagaaaacagagatcacagagaaa
cttcgtttggaaattaataaaattgtaaatcgttacattgagcaaggtgtagcagagttg
gtaccaggtgttttgttcattgatgaggttcacatgttggatatagaatgtttttcatac
ttaaatcgtgcattggagtcaacattggcaccaattgtagtttttgcaaccaatcgtggc
aattgtgtaatcaaaggcaccgataacgatattcaatctccacatggcatccctgtggat
cttttagatcgtcttatgatcattcgtacccttccatataattacaatgaaatcgttcaa
attctcaccattcgtgcctcaattgaaaatcataaaatcgatgacgaagcattgatgtat
ttagctgaaattggtaatacagcttcacttcgttatgcaattcaattattaacaccagct
tcaatcctttcaaaaacttattcaagaccatcaattacaaaagaagatattgaagaagtt
acatcattatttaatgatgctaaaacttctgcaaaattattagaacaaaataaatcaaaa
tatttatattaa
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