Dictyostelium discoideum (cellular slime mold): DDB_G0293546
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Entry
DDB_G0293546 CDS
T00245
Symbol
mre11
Name
(RefSeq) 3'-5' exonuclease
KO
K10865
double-strand break repair protein MRE11
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03440
Homologous recombination
ddi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDB_G0293546 (mre11)
03450 Non-homologous end-joining
DDB_G0293546 (mre11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddi03032
]
DDB_G0293546 (mre11)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0293546 (mre11)
DNA replication proteins [BR:
ddi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
DDB_G0293546 (mre11)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
DDB_G0293546 (mre11)
BRCA1-C complex
DDB_G0293546 (mre11)
NHEJ (non-homologous end-joining)
MRX complex
DDB_G0293546 (mre11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
DUF3246
Motif
Other DBs
NCBI-GeneID:
8629281
NCBI-ProteinID:
XP_628997
dictyBase:
DDB_G0293546
UniProt:
Q54BN2
LinkDB
All DBs
Position
6:3016431..3018565
Genome browser
AA seq
689 aa
AA seq
DB search
MEEEEIIEPKDFENEESENIQMDENEKQIPIQTTNDPQNKNIMRILVATDNHLGYLERDP
IRGDDSFNSFEEILKYAHTLKVDMVLLGGDLFHDNKPSRSCLYRTMELFRKYCLGDSPVR
IQFLSDQSVNFSNQFHTVNYEDPNFNISLPIFSIHGNHDDPTGEGGLAALDLLSVSNLVN
YFGKTEDIDDITVYPLLLGKGETKIAIYGLGNIRDERLHRTFQKQSVKLMRPVESKDEWF
NILVLHQNRVAHNPKNYVHEKMIESFIDFVLWGHEHECLVNPQASSVGEFHISQPGSSVA
TALSEGESKDKFVGLLEVYKNQFRFKPFPLNTVRPFIMDQIILANSNIHPTQQNDVIQWI
EQKVESMIEQAKLKSQGKPNESMLPLIRLKVDYTGYSTINPQKFGQRFQGRVANPNDVLL
FHRKKPTTLSSKKQKDGGELDVNSIKEKEEDKVKVADFISEFLGNTPNDRLQILSENDLF
NSLHSFVEKDETDSILKMVDLSLKSTQKYLNSKISSKDAYPDFIAKYIDDNFPLPHQNVS
SVNSDLLPINNPNEFESNLLDEDSHGHEHGHSHNHSQMIDNDDDENILNQRTIFKSPQSN
KTAPTTTTTTTTTTSSQISTRRKSSTQSSTQSSQTSIIIDDDDDDDEINEDNDDNDKDFE
SDEEKTPPSKKRGKVKQVGSVSKRSRSKK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaagaaataattgaaccaaaagattttgaaaatgaagaatcagaaaatatc
caaatggatgaaaatgaaaaacagataccaattcaaactacaaatgatccacaaaataaa
aatataatgagaattttagttgcaacagataatcatttaggatatttagaaagagatcca
attagaggtgatgattcatttaattcatttgaggagatattaaaatatgcacatacatta
aaagttgatatggtattattgggtggtgatttatttcatgataataaaccatcaagatca
tgtttatatcgtacaatggaattatttagaaagtattgtttaggtgattcaccagttaga
attcaatttctatcggatcaatctgttaatttttcaaatcaatttcatacagtgaattat
gaagatccaaattttaatatttcattaccaatattttcaatccacggtaatcacgatgat
ccaactggtgagggtggtttggcagctttagatttattatcagtttcgaatctagtcaat
tatttcggtaaaactgaagatattgatgatattacagtctacccattactacttggtaaa
ggtgagacaaaaatagcgatctacgggttaggtaatattagagatgagcgtttgcataga
acttttcaaaagcaatcagtgaaattaatgagaccggtggaatcaaaagatgaatggttc
aatattttagtacttcatcaaaatagggtagcccacaatccaaagaattatgttcacgag
aagatgatagaaagtttcatagatttcgttctatggggacacgaacatgaatgtttagtc
aatccacaggcatcgtcagtgggagaattccatatttcacaacctggttcttcagtagct
acagctttatcagagggtgaatcaaaggataaatttgtaggattgttggaggtttataaa
aatcaattccgttttaaaccattcccattgaacacggttagaccattcattatggatcaa
atcatacttgcaaatagtaacatacatccaacacaacagaatgatgtaattcaatggatt
gagcaaaaagtagaatcaatgattgaacaagccaaattaaaatctcaaggtaaacccaac
gaatcaatgttaccattgataagattaaaagttgattatactggttatagtactatcaat
cctcaaaagtttggtcaaagatttcaaggccgtgtagcaaatccaaatgatgttttatta
ttccacagaaagaaaccaaccactttatcaagtaaaaaacaaaaggatggtggtgaattg
gatgtgaattcaatcaaagaaaaagaagaagataaagtgaaagtggccgatttcataagt
gaattcttgggtaatacaccaaatgatcgtttacaaattctatcagagaatgatctattc
aatagtttacattcattcgttgaaaaggatgaaaccgattcaatattgaaaatggttgat
ctctctttaaaatcgactcaaaaatatttaaattcaaaaatctcttcaaaagatgcttac
ccagatttcattgctaaatatattgatgataatttcccattaccacatcaaaatgtatct
tcggtcaattcagatttattaccaataaataatccaaatgaatttgaatcaaatttatta
gatgaagattctcatggtcatgaacatggtcatagtcataatcatagtcaaatgattgat
aatgatgatgatgaaaacattttaaatcaaagaacaatttttaaatcaccacaatcaaat
aaaacagcaccaacaacaactactaccaccactactactacatcttcacaaatttcaaca
agaagaaaatcttcaactcaatcttcaactcaatcttcacaaacttcaattataatagat
gatgatgatgatgatgatgaaattaatgaagataatgatgataatgataaagattttgaa
agtgatgaagagaaaactccaccatcaaagaaaagaggtaaagttaaacaagttggttca
gtttcaaaaagatcaagatcaaagaaataa
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