Dictyostelium discoideum (cellular slime mold): DDB_G0293712
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Entry
DDB_G0293712 CDS
T00245
Name
(RefSeq) longin domain-containing protein
KO
K08516
synaptobrevin homolog YKT6
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
DDB_G0293712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0293712
Membrane trafficking [BR:
ddi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
DDB_G0293712
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
GAT
Mod_r
Motif
Other DBs
NCBI-GeneID:
8629310
NCBI-ProteinID:
XP_629024
dictyBase:
DDB_G0293712
UniProt:
Q54BK5
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All DBs
Position
6:3080260..3080990
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AA seq
187 aa
AA seq
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MKLVAMVLAKRKGDLLEIACDLSQFGFFEKGTVKEVIIAASKIFINKFDPNTRHSVPYED
YICFIDVRAEFGGVVFTDKEYPERVAARLLSEMMNGYVKKTQGIIGAPYPELQGIFKNSD
PKANDKILEVQNQVNEVTSIMHKNIDVALGNTEKMETLLETSDDLSTRSKLFLKQAKKAN
RRCCIIQ
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagttgctatggtattagcaaaaagaaaaggggatttattagaaattgcctgt
gatttatcacaatttggtttctttgaaaagggaactgttaaagaagtaataatagcagca
agtaaaatttttataaataaattcgatccaaacacaagacattcagtaccatatgaagat
tatatctgttttatagatgttagagctgaatttggtggtgttgtatttacagataaagaa
tatccagaaagagtagcagcaagattattatcggaaatgatgaatggttatgtaaagaaa
actcaaggtattattggtgcaccatatccagaattacaaggtatatttaaaaattcggat
ccaaaagcaaatgataaaattttagaagttcaaaatcaagtgaatgaagtcacttcaatt
atgcataaaaatattgatgttgctttaggtaatactgaaaaaatggagaccctattagaa
acttctgatgatttaagcacaagaagtaaattatttttaaaacaagctaaaaaagcaaat
agaagatgttgtattattcaataa
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