Desulfitobacterium dichloroeliminans: Desdi_1357
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Entry
Desdi_1357 CDS
T02390
Name
(GenBank) type IV secretory pathway, VirD4 component
Organism
ddl
Desulfitobacterium dichloroeliminans
Pathway
ddl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ddl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Desdi_1357
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
ACAS_N
Motif
Other DBs
NCBI-ProteinID:
AGA68866
UniProt:
L0F878
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Position
1390683..1392500
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AA seq
605 aa
AA seq
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MQTSQIIILTAAGLTMFGVIGMLSLIAHYYTLNGIKSKIVGDGQHGTARWATKREIKKTY
TEVPYEPEKWRKGESFPKAQGLIVGWRKALLFDNTAPHGYAMVDDDDIHCLMIGAAGVGK
TANFLYPNLEYACACGMSFVTTDTKGDLYRNYAGIAKDFYGYDVAVIDLRNPTRSDGNNL
LHLVNRYMDAYLKNPQNLAFKARAEKYAKITAKTIINSGGFDTAMAGQNAFFYDAAEGLL
TSVILLIAEYCEPKQRHIVSVFKLIQDLLAPSGVKGRTLFQLLLAHLPDEHKTKWFAGAA
LNTAEQAMQSVLSTALSRLNAFLDSELEQILCFDTAIDAEKFCINKSAIFLVMPEEDNTK
YFIISLIVQQLYREILSLADEHGGKLPNRVMMFLDEIGTIPKIESAEMMFSASRSRRVSI
VAIIQSFAQLEKNYGREGSAIIIDNCQDTVFGGFAPNSESAQILSKAMGSKTVMSGSISR
GKNDPSQSLQMIERPLMTPDELKSMPKGHFIVTKTGAYPMRTKLKLFTKWGITFGKPYEI
AEKSARKVEYADRRRVEEEIIRRHSACVDVAEEAEAGAAASGGLLHTPFQEPEAPVRTKS
PVRIE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
ttgcagacatcccaaatcattatcttaaccgctgccgggctgaccatgttcggcgttatc
ggaatgttatcactcatagcgcattactacaccttaaacgggatcaagtccaaaatcgtc
ggcgacggccagcatggtacggcgcgctgggcaacaaagcgggagattaaaaagacttat
acggaagttccctacgagccggagaagtggagaaagggcgaaagttttccgaaagcgcag
ggtctgatagttggctggaggaaagcgttgctatttgacaatactgctccgcatggatat
gcgatggtagacgatgacgatatccactgcctgatgatcggtgcggcaggcgtcggtaag
accgctaactttctctatcctaatctggaatatgcctgcgcctgtggcatgagctttgtg
accaccgacaccaagggcgacctctaccgcaactatgccggaattgccaaagacttctac
ggctatgatgttgctgtcattgacctaagaaaccctacccgctcggacggaaacaatctt
ctccacctggtcaacaggtatatggacgcatacttgaaaaatcctcagaatcttgcgttt
aaggctagagctgagaagtatgcgaagattaccgcaaagaccatcatcaactctggaggt
tttgatacagcaatggccgggcaaaatgcctttttctatgacgcagcggaaggactgctg
acatccgttattctgcttatagcggaatactgtgaaccaaaacagaggcacatcgtgtcc
gttttcaagctcattcaggatctgcttgcgcccagcggcgtcaagggcaggactttgttt
caactgctccttgcccatctgccggatgagcataaaacaaaatggtttgctggggcggca
ctcaacactgcggagcaggccatgcaaagcgttctctccactgcgctgtcccggctcaat
gcatttctggactctgaactagagcaaatcctgtgctttgacacagccattgatgcggag
aagttctgtatcaataaaagtgcaatattcctggtaatgccggaggaagacaacaccaag
tatttcattatcagtctgatcgtacagcagctctaccgtgaaatcctgtcattggccgac
gagcatggcggaaagcttcccaaccgtgtgatgatgttcctcgacgagatcggaaccatc
cccaaaatcgagtcggcggagatgatgttctcggcttcccgttcccgccgtgtgtccatt
gtagccatcatccagagctttgcacagctggagaaaaactatggccgcgaaggctctgct
atcatcatagacaactgccaggataccgtgttcggggggtttgctcccaatagcgaatca
gcgcagattttatcaaaagccatgggaagcaagacggtcatgagcggctccatcagccgg
ggtaaaaacgatccgtcgcagagtctgcagatgattgagcgtccgctgatgacgccggac
gagctgaagtctatgccaaagggccattttattgtcaccaagacgggcgcttacccgatg
cgtaccaaattaaagctatttacgaaatggggcataaccttcggcaagccttatgagatt
gccgagaaatcggctcgaaaggtggagtatgccgacaggcgcagagtagaggaagaaatc
atccgccgtcactctgcctgcgttgatgtggcggaggaagctgaagctggtgcagccgca
tcgggcgggttactgcatacaccgtttcaggagcctgaagcgcctgtcaggacaaaatcg
cctgttcggattgaatag
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