Desulfitobacterium dichloroeliminans: Desdi_1769
Help
Entry
Desdi_1769 CDS
T02390
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ddl
Desulfitobacterium dichloroeliminans
Pathway
ddl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Desdi_1769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddl03019
]
Desdi_1769
Messenger RNA biogenesis [BR:
ddl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Desdi_1769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AGA69241
UniProt:
L0F999
LinkDB
All DBs
Position
1803130..1804800
Genome browser
AA seq
556 aa
AA seq
DB search
MTKENKLQIIPLGGLGEIGKNMTIIRYNNQILIIDVGMAFPDDDMPGIDVVIPDMTYIME
NKDLVLGVLITHGHEDHIGALPYLLRNLDVPVYGTRLALGIIQTKLNEAKLSNVRTVEIA
PRDSVKLGVFKVEFINVSHSIPGAVGLAIHTPLGTVVHTGDFKLDHTPASGEMLDVHKFA
ELGDRGVLCLLSDSTNVERTGFTPSEKFVGQNIDEAFSSAEGRIIFASFASNVNRLQQAI
LAAHKYNRKVAVVGRSMVNVVDIASDLGYLDIPEDTLVEVDEIVNLPVEEVCILTTGSQG
EPMSALTRMAQHDHRQISISPGDTVIISASPIPGNEKAVARNIDMLFKLGAKVIYEHISG
MHVSGHASQEELKLMISMVKPRYFLPVHGEYRMLMKHADLAGELGIPKENTFIAEIGNVI
EFTRHGARIADKVTSGRVLIDGLGIGDVGNIVLRDRKQLSQDGILIIVLTLNGANGSILS
GPDIVTRGFVYVRESEPMLDEVKENTRRIMARCQQNGIREWASLKNQIRDGVGKQLYDKT
KRRPMIIPIIQEVKGL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
ttgactaaagaaaacaaattacagattattcccctcggtggattaggggaaattgggaag
aacatgaccatcatccggtataataaccagattctaattattgatgtgggtatggctttt
ccggatgatgatatgccagggattgatgtcgttattcccgacatgacgtatatcatggaa
aataaggatttagtcctcggagttttaatcactcatggtcacgaagatcatatcggagcc
ctaccttatctgctcagaaacttagacgtacccgtttatggaacacgtttggctcttggc
ataattcaaacgaaattgaatgaagctaagttaagtaatgttagaactgttgagattgct
ccgcgagattcggtgaagctcggtgtattcaaagttgaattcattaatgtcagtcatagc
attcccggtgctgttggtttagccattcatactccgctgggaactgtcgtacacaccgga
gacttcaagctggaccacaccccggcaagcggggaaatgctcgatgttcacaagtttgct
gagcttggggatagaggggtgctttgtttgctatcggacagtaccaacgtcgaacgcaca
ggctttactccatcagaaaaatttgtaggacagaatatcgatgaggcgttttcgagcgcc
gaaggacgaattatttttgctagctttgcttcaaatgtcaatcgattgcaacaagctatt
ttagcagcgcacaaatacaatcgcaaggttgctgttgttgggcgtagtatggtgaatgtc
gtggatattgcctctgatttaggctatttggatatccctgaagatacgttggttgaagtg
gacgaaattgttaatctacccgttgaagaagtatgcattcttacaacaggtagccaaggt
gagcctatgtcagctttaacgcggatggctcaacatgaccatcgtcaaatatctatcagc
cctggggacaccgtaatcatttctgcatcacctattcccggtaacgagaaggctgttgca
cgtaatattgatatgcttttcaagcttggtgcaaaggtgatatacgagcacatttcgggg
atgcacgtatctgggcatgcaagccaggaagaattaaagttgatgattagcatggttaaa
ccccgttacttcttacctgtgcacggtgagtatcgtatgcttatgaagcatgcggacctt
gctggtgaacttggtataccaaaggaaaatacatttatcgccgaaatcggcaatgttatc
gagttcactcgacatggcgctagaattgctgataaagtaacatccggtcgagttctcatc
gatggcttaggtataggcgatgtgggtaatatagtattgagagatcgcaagcaactctca
caagatgggatccttattattgtgctgaccttaaatggcgctaatggatctattttgtca
ggaccggatattgttacccgaggatttgtctatgtaagggaatctgaaccgatgcttgat
gaggttaaggaaaacacacgtagaattatggctcggtgtcagcaaaatggcattcgagaa
tgggctagtcttaaaaaccagattcgtgatggggttggcaaacaactttacgataaaaca
aagagacgacccatgattattcctattattcaagaggttaaaggtctttaa
DBGET
integrated database retrieval system
