Desulfitobacterium dichloroeliminans: Desdi_2525
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Entry
Desdi_2525 CDS
T02390
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ddl
Desulfitobacterium dichloroeliminans
Pathway
ddl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Desdi_2525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddl03400
]
Desdi_2525
Enzymes [BR:
ddl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desdi_2525
DNA repair and recombination proteins [BR:
ddl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desdi_2525
RecFOR pathway proteins
Desdi_2525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
AAA_22
NB-ARC
nSTAND3
AAA_14
AAA_3
DUF815
RNA_helicase
TIP49
AAA_24
TsaE
NTPase_1
AAA_18
ABC_tran
Bac_DnaA
AAA_28
Sigma54_activ_2
NACHT
IstB_IS21
Resolvase
AAA_17
AAA_19
NPHP3_N
AAA_25
KAP_NTPase
RsgA_GTPase
Parvo_NS1
Rad17
Motif
Other DBs
NCBI-ProteinID:
AGA69948
UniProt:
L0FAH7
LinkDB
All DBs
Position
complement(2561639..2562682)
Genome browser
AA seq
347 aa
AA seq
DB search
MEERMIAPQQLPGDQEGEVLRPHRLADYIGQTKVKENLHIFIQAALARGEALDHVLLYGP
PGLGKTTLANIIATEMEVNIRTTSGPAIERPGDLAAILTSLEPRDVLFIDEIHRLSRTTE
EILYSAMEDGCLDIMIGKGPSARSIRLSLSPFTLVGATTRAGQLASPLRDRFGVISRLEF
YEVDDLIKIISRAAGILSLNITLEGATEIARRSRGTPRIANRLLKRVRDYAQVWEDGLVS
QELASKSLDRLEVDPAGLDRIDQKCLLTIIQMFSGGPVGLETLSATIGEESETIEDVVEP
YLLQQGFLQRTPRGRVATVRAYQHLNIPLTTVPKDNLPEDSLFEDEE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacggatgatagcaccccagcagcttccgggtgatcaggaaggtgaagtcctt
cgaccccaccggctggcggattatataggccagacgaaagttaaggaaaatctacatatt
tttattcaggcagctttagctagaggagaggctctcgaccatgtgctcctctatggccct
cccggcttgggaaaaactacgttggctaatatcatcgccacggagatggaggttaatatc
cgaactacctcggggccggcaatcgaacgacccggggatttggcggctattctgacctct
ttggagccgcgtgatgtcctctttattgatgaaattcatcggctcagccggaccactgaa
gaaatactctattctgccatggaggatgggtgcttggatatcatgattggcaaaggccct
agcgcccgttccattcgtttatctttatcaccctttactctggttggggcaaccacccgg
gccgggcagttggcctcacccttaagagatcgctttggggtcatcagccgattggagttc
tacgaggttgacgatttaatcaagattatttctcgggcggcagggatattaagcctaaac
ataacgcttgaaggagcgacggaaatagccaggagatctcgtgggactccacgaattgcc
aatcgcctcttaaagcgagtgcgagattatgcccaagtctgggaagacggacttgtcagt
caagaattggcaagtaaatcattagatcgtcttgaagttgacccggctggattggatcga
attgaccaaaagtgccttctcaccattattcagatgttttccggtggacccgtcggtttg
gagaccctttccgcgaccatcggtgaagaatccgaaaccatcgaggatgtggtggaaccc
tacctccttcaacagggatttttgcagagaacacctcgcggcagagtggcaacagttcgc
gcataccagcatctcaatattccgctaacaacagtgcccaaggataacttacctgaggac
agtttgttcgaagacgaggaatag
DBGET
integrated database retrieval system
