Desulfitobacterium dichloroeliminans: Desdi_2527
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Entry
Desdi_2527 CDS
T02390
Name
(GenBank) Holliday junction endonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
ddl
Desulfitobacterium dichloroeliminans
Pathway
ddl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Desdi_2527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddl03400
]
Desdi_2527
Enzymes [BR:
ddl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Desdi_2527
DNA repair and recombination proteins [BR:
ddl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desdi_2527
RecFOR pathway proteins
Desdi_2527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AGA69950
UniProt:
L0FA94
LinkDB
All DBs
Position
complement(2563312..2563809)
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AA seq
165 aa
AA seq
DB search
MLILGIDPGTAIMGYGLIEKKGSRLLAVDYGCWRTPAHTPMTERLLMLYNDIAACIKNHQ
PNFVAVEELFFNRNTTTAISVGQARGVILLAAAQAGIPVSEYTPLQVKQSVTGYGRADKQ
QIQQMVKALLGLPEIPKPDDTADALAIAICHAHSVNLLNRMGGSL
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgctaatactcggaattgacccaggaactgcaattatggggtatggattgattgaaaag
aagggtagccgtttgcttgctgtagattatggctgttggcgtactccagctcatacaccc
atgactgagcggttgctaatgctctataatgatattgcagcctgcatcaagaaccaccag
cctaactttgtggctgttgaggaacttttttttaatcgtaacaccactactgctatctct
gtcggacaggctaggggagtcattttactagctgctgcccaagcggggattccggtgtct
gaatacacgcccttacaggttaagcaatccgtaaccggttacggaagagcggataaacaa
cagatacaacagatggtcaaagccctgctcggcctaccggagataccgaagcccgatgat
acggcagatgctttagccatcgctatctgtcatgcccatagtgtgaatttgctcaataga
atggggggatctctttga
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