Desulfitobacterium dichloroeliminans: Desdi_2608
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Entry
Desdi_2608 CDS
T02390
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ddl
Desulfitobacterium dichloroeliminans
Pathway
ddl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ddl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desdi_2608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddl03400
]
Desdi_2608
Enzymes [BR:
ddl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Desdi_2608
DNA repair and recombination proteins [BR:
ddl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Desdi_2608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AGA70024
UniProt:
L0F897
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All DBs
Position
complement(2643848..2644678)
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AA seq
276 aa
AA seq
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MPLLFGTAGVPISARVRSTEAGVKRVRELKLDAMEIEFVHGVRMGEEKASKIAKIALEEN
VALSCHGPYWINFNSREPEKVKASRDRLLHSARISKILGVRSVVFHPAFYHDDDPQVVLE
RTAGELMKVREILDVEGNEIILRPETTGKPSQLGTLREVLNLAQEVPGVLPCIDISHLYA
RSNGKINTYDEFCQVLEETAQALGDQWVKNAHFHVSGIDYGLKGEKKHLVLAEADFRYPE
LIKALHTFGVEGLVICESPNLEVDALLMQTTYRSLG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgccattgttatttgggacggccggcgttcctatatcggcccgggtacgttcgacggaa
gcaggggtgaagagagtccgagagcttaaactggatgccatggaaatagaatttgttcat
ggtgtccggatgggagaagagaaggctagcaaaattgccaagatagcgcttgaagagaat
gttgctttaagctgccatggtccatactggattaacttcaattcacgagaaccggaaaag
gtaaaggccagccgcgatcgccttctgcatagtgcacggattagtaagatcctaggcgta
agaagcgtggtttttcatccagctttttaccatgatgatgatccccaggtggttttagag
cgaacagcaggcgaactcatgaaagttcgtgagattctagatgttgagggtaacgaaatt
atattaagaccggagacgacagggaaaccctcacagctaggtacccttcgggaagttttg
aacttggcccaagaggtgcccggagtactcccttgtattgatatcagccatctctatgca
cgcagcaatggaaagattaatacttatgatgagttttgtcaggttctcgaagaaaccgct
caagctcttggcgaccaatgggtgaagaatgcgcattttcatgtttcgggtatcgattac
ggactaaagggcgaaaagaagcatttagtcttggctgaagcggattttcgctatccggaa
ttgataaaagcacttcacaccttcggggtagaaggattagtgatttgtgaaagccccaac
cttgaagtcgatgctttattgatgcaaactacgtatcgtagcttagggtga
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