Desulfitobacterium dichloroeliminans: Desdi_3052
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Entry
Desdi_3052 CDS
T02390
Name
(GenBank) RNAse G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ddl
Desulfitobacterium dichloroeliminans
Brite
KEGG Orthology (KO) [BR:
ddl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddl03019
]
Desdi_3052
03009 Ribosome biogenesis [BR:
ddl03009
]
Desdi_3052
Messenger RNA biogenesis [BR:
ddl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Desdi_3052
Ribosome biogenesis [BR:
ddl03009
]
Prokaryotic type
rRNA processing factors
Desdi_3052
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF6101
dCache_2
DUF1947
HdrB-like_C
Motif
Other DBs
NCBI-ProteinID:
AGA70457
UniProt:
L0FB54
LinkDB
All DBs
Position
complement(3101039..3102283)
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AA seq
414 aa
AA seq
DB search
MKEIVLQGQGQTMRAAVLEDGELVEVHEEEGMLARLVGNIYRGRVVNILPGMQAAFVDIG
LEKNAFLYVGDAVPFQYDEDEKLPTSTELRVEHVLKPRQELLVQVAKEPVGSKGARITTN
LTIPGRYAVLMPHTEYVGVSRKITDEQERLRLRKIARAACPPGKGIVVRTLAKGIDAQEL
EDDLQELVALWDQVEKEVLHISIPGLVHQDVNLVARAIRDWVDQEVEVITVNQPEVAEGM
RQALKELGHPAANQVRLIYQEDIFSNYSIDDEIRHALQSKVWLKSGGYLVIQQTEALSVI
DVNTGKYVGEKSLQDTIMHINQEAAAEIARQIRLRNLGGIIVIDFIDMTTEEAKEQLMNV
LEKAVARDKVKCQIMGLTQLGLVEMTRKKVGQTLEVRYGRACPHCEGTGRIVKG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagagattgtactgcaaggtcaaggccaaaccatgcgggcagcggttcttgaggat
ggagagctcgtcgaggttcatgaagaggaaggtatgctagcgcgtctagtcggcaatatt
tatcgaggaagggtcgtcaacattctgccgggcatgcaggcagcctttgtcgatattggt
ttggagaagaatgctttcctttatgtaggagatgcggtccccttccaatatgatgaggat
gagaaactcccgacctcaaccgaattgcgcgtggaacacgtgcttaagcctcgacaagag
cttttggttcaagtagccaaagaacctgtggggtcaaagggggcacgaattaccaccaat
cttaccatccctggtcgttatgcggttctaatgccccacacagaatacgttggggtatca
cgcaagattaccgatgaacaggagcggctgcgtctgcggaagattgctcgagcagcgtgt
ccgcctggaaaagggattgtggtgcggaccttggccaaaggaattgatgcccaagaactt
gaggatgacttgcaagagctcgtggctttgtgggaccaagtggagaaagaagttcttcat
atctcgattccgggattggttcatcaagacgtgaatttagtagcgagggcgattcgcgat
tgggtcgatcaagaggttgaggtgattacggtcaatcaaccggaagtagcagaaggaatg
cgtcaggctttaaaggagttaggccatccggcggcgaatcaggtgcgcttaatttatcaa
gaggatatcttctctaactatagtatcgatgatgaaatccgccatgccctgcagtccaag
gtatggctgaagagcggcggctatttagtgattcagcagacagaggccttatcggtcatt
gatgtgaatacaggaaaatatgtaggggagaaatccctccaagatacgatcatgcatatt
aatcaagaagctgctgcggagattgcgagacagattcgtttacgtaatttgggtggaatc
atcgttattgattttattgatatgacgactgaagaagccaaagaacaactaatgaacgtc
ttggaaaaggctgtagctcgggataaggtaaagtgtcaaatcatgggtctaactcaattg
ggacttgtggaaatgacacgcaaaaaagtaggacaaactctcgaggtacgctatggaaga
gcctgtccccattgtgaaggtacgggaagaatagtgaagggttga
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