Desulfitobacterium dichloroeliminans: Desdi_3139
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Entry
Desdi_3139 CDS
T02390
Name
(GenBank) A/G-specific DNA-adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ddl
Desulfitobacterium dichloroeliminans
Pathway
ddl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ddl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desdi_3139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddl03400
]
Desdi_3139
Enzymes [BR:
ddl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Desdi_3139
DNA repair and recombination proteins [BR:
ddl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desdi_3139
Prokaryotic type
Desdi_3139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
EndIII_4Fe-2S
HHH
DUF7557
Motif
Other DBs
NCBI-ProteinID:
AGA70540
UniProt:
L0FC24
LinkDB
All DBs
Position
complement(3188363..3189565)
Genome browser
AA seq
400 aa
AA seq
DB search
MKPQMKNEIDTHIRFNNWAPSLVGWYRRVKRDLPWRRSKCAYAIWVSEVMLQQTQVITVI
PYYQRFMERFPDVFALAGASEEEVQELWRGLGYYSRARRLWEGARYVVRTTGGRMPEDFA
SLLMIPGVGEYTAGAIASIAYGECVPAIDGNVKRVLSRLLRWEEDVDKAKSYRFFLEYIK
IVLPADCPGDFNQGLMELGATVCTPKNPKCELCPLQVDCQGYSLGNPTVYPVKKSREKVK
EVLRPTLILVCEGRVLLKKRPSEGLLANLWEFPGEELILDSLADYSWYDLYKTQVIDRSY
DEIVEELLQAKTNVQGPLVHTFSHRRWQMYWVVLNLDAGQSLDVHNSEQTIRESSSDYLG
SEDRTCWLDVSQLERIALPVAFQKIWSTATGITESVSNSC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacagatgaaaaacgagatagatactcatataagattcaataattgggctccc
agccttgtgggctggtatagacgggtcaagcgggatttgccttggcgaaggtcaaagtgt
gcttatgccatatgggtatctgaggtgatgcttcagcagactcaggttatcactgtgatc
ccctattaccaacggtttatggagcggtttccggatgtttttgctttggccggagccagt
gaagaagaggtgcaggagctatggcgtgggctggggtattactctcgtgccagacggtta
tgggagggtgctcgctatgtggtgaggacaacagggggaagaatgccggaagactttgct
tccctgcttatgatccccggagtcggtgaatatactgccggagctattgctagtattgct
tatggggaatgtgtcccagcgattgatgggaatgtcaaaagggtgttgagccgcctcctg
cgctgggaagaagatgtagataaggctaaatcttatcgtttttttctagagtacataaaa
atagtattgcctgcggattgtccgggggactttaaccaaggattgatggagcttggggcg
actgtgtgtactcctaagaatccaaaatgcgaactatgcccactgcaggttgattgtcag
gggtattctttaggtaatcctactgtctacccggtgaaaaagagtcgtgagaaggttaag
gaagtccttcggccaactctaatcctagtatgcgaggggcgagttcttctgaagaaacga
ccttcggaagggctgctggctaatctgtgggaatttccgggggaagaactcatcctcgac
tccctagcagattattcttggtatgatctctataaaacacaggtgattgaccgttcttat
gatgaaatcgtcgaagagctgcttcaggccaaaacgaatgtacaagggcccttagtccat
acgttcagccatcgacgttggcagatgtattgggtagtccttaatctagatgccggtcaa
agtctagatgttcataattcagagcaaacgattagagagtcatcctcagattatcttggg
tctgaagataggacctgttggttggatgtatcgcagctggagcgcatcgctcttccggtg
gcctttcagaagatctggtccaccgcaacaggaatcacagaatctgtgtcgaattcctgt
tag
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