Desulfitobacterium dichloroeliminans: Desdi_3477
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Entry
Desdi_3477 CDS
T02390
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ddl
Desulfitobacterium dichloroeliminans
Pathway
ddl00300
Lysine biosynthesis
ddl00470
D-Amino acid metabolism
ddl01100
Metabolic pathways
ddl01110
Biosynthesis of secondary metabolites
ddl01120
Microbial metabolism in diverse environments
ddl01230
Biosynthesis of amino acids
Module
ddl_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
ddl_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ddl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Desdi_3477
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Desdi_3477
Enzymes [BR:
ddl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Desdi_3477
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AGA70863
UniProt:
L0FD35
LinkDB
All DBs
Position
complement(3572281..3573531)
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AA seq
416 aa
AA seq
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MAVKNLPFSQEQLMKIIQQFGTPFHIYDEQAIRLNARRLQAAFAWAPEFKEYFAVKALPN
PHILKILREEGFGADCSSMAELILAEAARITEENIMFTSNNTPAEEYIKARELWAIINLD
DITHIDYLEKHAGIPEVISFRYNPGSLRAGNAIIGNPEDSKYGLTKEQLFQAYKIVRDKG
AKRFGLHTMIISNELKPEFFIETAEMMFDLAIELKEKLGIRLEFVNFGGGIGIPYRPEQE
PVDLGYIGEGVRKAYEERIIPNDLDPLRICLECGRMVTGPYGYLVTRVLHKKQIYKDYVG
VDASMSDLMRPGMYGAYHHISVVGKEDLPRDHIYDVAGALCENNDKFAVDRELPRVDIGD
IIVIHDTGAHGHAMGFNYNGKLRHAELLLQPDGSVRIIRRAETLDDYFATLDFSDL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaagaatttgcctttttcccaagaacagttaatgaagattatccagcagttt
ggcacgccttttcatatttatgacgagcaggccattcgactaaatgcccggagactacag
gcagcttttgcttgggctccagagtttaaagagtactttgcagtgaaggctctccccaat
ccacatatcctcaaaattctccgggaagaaggctttggagcagattgcagttccatggct
gagctgattttagctgaggcggctagaattactgaggagaatatcatgttcacctccaat
aacactcccgctgaagaatatataaaggctagggaattatgggcgattattaacctagac
gacatcacccacattgattatctggaaaagcatgcgggtataccggaagtgatttctttc
cgctataaccccgggtcattacgagcaggtaatgctattattgggaatcccgaggactcc
aagtatggcttgacgaaggagcaattgttccaagcttataaaattgttcgtgataagggt
gcgaagcgttttggcctgcataccatgattatttcgaacgaactcaagccagaatttttt
attgagacagcagaaatgatgtttgacttagcgattgaattgaaagagaagttgggtatc
cgtttggagtttgtaaactttggtggcggtattggcatcccctatcgtcctgagcaagaa
ccagttgatttggggtatatcggcgagggggtacggaaagcttacgaagaaaggattatc
cccaatgacttagatcccttgcgcatttgtttggaatgcgggcggatggtgacaggaccc
tatggttatctggtaacacgggtattgcataagaagcagatttataaggattatgtgggt
gtggatgccagcatgtcggaccttatgcgtccaggtatgtatggagcctatcatcatatt
tccgttgtgggaaaagaggatctacccagagatcatatctacgatgtggcaggtgcccta
tgtgagaataacgataagtttgctgtggatcgtgaactccctcgagtggatattggagat
attattgtcatccatgatacaggtgcccacgggcatgcgatgggttttaactataacggt
aagcttcgtcatgcagaattgttgctgcagcctgacggtagtgtgagaataattcgccgg
gctgagactctggatgattattttgccaccttggactttagcgatctataa
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