Pseudodesulfovibrio mercurii: DND132_0238
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Entry
DND132_0238 CDS
T01709
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
ddn
Pseudodesulfovibrio mercurii
Pathway
ddn03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
DND132_0238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ddn03011
]
DND132_0238
Ribosome [BR:
ddn03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
DND132_0238
Bacteria
DND132_0238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
EGB13455
UniProt:
F0JE15
LinkDB
All DBs
Position
complement(268542..270002)
Genome browser
AA seq
486 aa
AA seq
DB search
MSEEFKERNGVEEGEESFAELFEQYSEGGGDDLSVGDKVTGTVIQVGENTVFVDTGTKLD
GIVEREELLDEDGNCTVAEGDKVELYVVGKDSGGIKLSRAISGIGGMAMLEEAKAGALPV
EGKVESTCKGGFNVTILQRRAFCPVSQIDARFVENPEEYVGQTLEFLITKLENHGRNIVV
SRRALVEREAAESAQTFVDETKVGDEVEGTVTRLAAFGAFVEIMPGLEGLVHISQLGYGR
VSHPEEVVSVGQKVRAKITKLDKDDKGRLKISLSMKELAQNPWDTLSATFAVGDIVSGKV
VRLADFGAFVEIAPGVDGLVHVSEMSYTKRVNKPADMVKEGDAVTVKIKSIDLDKRRIGL
SMKDAEGDPWAGVADRYQAGQKVEGVVEKQEQFGIFVQLEPGITGLLPKSVIARSEKPAA
FEKLRAGDTVEVVIGEVKTGERKISLSTGDVRDDGDWKEFAPKRKADTGSMGLLGAKLQE
ALDKKK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaagaattcaaagagcgtaatggcgtggaagaaggcgaagagtccttcgccgaa
ctgttcgaacagtacagcgaaggcggcggagacgacctgtccgtgggcgacaaggtgacc
ggcaccgtcatccaggtgggcgagaacaccgtcttcgtggacaccggcaccaagctggac
ggcatcgtcgagcgcgaggaactgctggacgaggacggcaactgcaccgtggccgaaggc
gacaaggtggagctgtacgtggtcggcaaggactccggcggcatcaagctgtcccgcgcc
atctccggcatcggcggcatggccatgctcgaggaggccaaggcgggcgccctgcccgtg
gagggcaaggtcgaatccacctgcaagggcggcttcaacgtgaccatcctccagcgccgg
gccttctgcccggtgagccagatcgacgcccgcttcgtggagaaccccgaggagtacgtg
ggtcagaccctggaatttcttatcaccaagctcgagaaccacggccggaacatcgtggtc
tcccgccgcgccctggtcgagcgcgaggccgccgagtccgcccagaccttcgtggacgag
accaaggtcggcgacgaggtcgagggcaccgtcacccggctggccgccttcggggccttc
gtcgagatcatgcccggcctggaagggctggtgcacatctcccagctcggctacggccgc
gtgagccaccccgaggaggttgtctccgtgggccagaaggtccgggccaagatcaccaag
ctggacaaggacgacaagggacggctcaagatttccctgtccatgaaggaactggcccag
aacccctgggacaccctgtccgccaccttcgccgtgggcgacatcgtctccggcaaggtc
gtccggctggccgacttcggcgcgttcgtggagatcgccccgggcgtggacggattggtc
cacgtctccgagatgagctacaccaagcgcgtgaacaagcccgccgacatggtcaaggaa
ggcgacgcggtcacggtcaagatcaagtccatcgacctggacaagcgccgcatcggcctg
tccatgaaggacgccgagggcgacccgtgggccggcgtggccgatcgctaccaggcgggc
cagaaggtcgagggcgtggtcgagaagcaggagcagttcggcatcttcgtgcagctggag
ccgggcatcaccggcctgctgcccaagtccgtcatcgcccgctccgagaagcccgccgcc
ttcgagaagctgcgcgccggggacaccgtggaggtggtcatcggcgaggtcaagaccggg
gagcgcaagatatccctgagcacgggcgacgtccgcgacgacggcgactggaaggagttc
gcgcccaagcgcaaggccgacaccggctccatggggctgctcggcgccaagctccaggaa
gccctggacaagaagaaataa
DBGET
integrated database retrieval system
