Pseudodesulfovibrio mercurii: DND132_0468
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Entry
DND132_0468 CDS
T01709
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ddn
Pseudodesulfovibrio mercurii
Pathway
ddn00300
Lysine biosynthesis
ddn00470
D-Amino acid metabolism
ddn01100
Metabolic pathways
ddn01110
Biosynthesis of secondary metabolites
ddn01120
Microbial metabolism in diverse environments
ddn01230
Biosynthesis of amino acids
Module
ddn_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DND132_0468
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DND132_0468
Enzymes [BR:
ddn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DND132_0468
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
EGB13685
UniProt:
F0JFC9
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All DBs
Position
517054..518292
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AA seq
412 aa
AA seq
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MHHFQQRDGVLFAEEVSVTALAKQYCTPLYIYSAATFRRHFHAFDSAFDALDHLTCFSVK
ANSNLAVLKMLAAEGAGMDIVSGGELYRALQAGVDPSRIVYSGVGKRDSEIREALEARIL
MFNVESLAELERIDQVAGEMGTTARVSFRINPDVDPQTHPYISTGMQKNKFGLDIDMSMQ
AYKRAAELKHVEPVGMDCHIGSQLTSLDPFLEALDKLLAFNARLKDLGIEIKYLDLGGGL
GIPYNEEEPPHPAEFGKALSDKLKGLPLKVILEPGRVIAGNAGILVTEVVYTKSNPAKNF
LIVDAAMNDLVRPSLYGSYHRIAEVEPKGRAPKVFDVVGPICESGDFLARDRELPEVMQG
ELLVVYSAGAYGFSMSSNYNSRPRACELLVDGDKVIVARRRETYDDLLMNEL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatttccaacaacgggacggcgtactgtttgccgaagaggtcagcgtgaccgca
ctggccaagcagtactgcaccccgctttatatctactccgccgccaccttccggcggcat
ttccacgcctttgactccgccttcgatgccctggaccacctgacctgcttctcggtcaag
gccaactccaacctggccgtgctcaagatgctggccgccgagggcgcgggcatggacatc
gtctcgggcggcgaactctaccgcgccctccaggccggggtggacccgagccgcatcgtc
tattccggcgtgggcaagcgggattccgaaatccgcgaggccctggaggcgcgcatcctg
atgttcaacgtggagtccctggccgagcttgaacgcatcgaccaggtggccggcgagatg
ggcaccacggcgcgcgtcagcttccgcatcaacccggacgtggacccgcagacccacccg
tacatctccacgggcatgcagaagaacaagttcggcctggacatcgacatgtccatgcag
gcctacaagcgggccgccgaacttaagcacgtggagcccgtgggcatggactgccacatc
ggttcccagctgaccagcctggacccgttcctcgaggccctggacaagctcctggccttc
aacgcgcggctcaaggatctgggtatcgagatcaagtacctggacctgggcggcggcctg
ggcatcccctacaacgaggaggagccgccccaccccgccgagttcggcaaggccctgagc
gacaagctcaaggggctgcccctcaaggtcatcctggaaccgggccgggtcatcgccggc
aacgcgggcatcctggtcaccgaggtggtctacaccaagtccaacccggccaagaacttt
ctcatcgtggacgcggccatgaacgacctggtccgcccgagcctgtacggctcctaccac
cgcatcgccgaggtggagcccaagggccgcgcgcccaaggtcttcgacgtggtcgggccc
atctgcgagtccggcgacttcctggcccgtgaccgcgagctgcccgaggtcatgcagggc
gagctgctggtcgtctactcggccggggcctacggtttctccatgtcctccaactacaac
tcccggccgcgcgcctgcgaattgctcgtggacggcgacaaggtcattgtcgcccgcagg
cgggagacatatgatgatctcctaatgaacgaactctag
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