Pseudodesulfovibrio mercurii: DND132_0508
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Entry
DND132_0508 CDS
T01709
Name
(GenBank) Smr protein/MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
ddn
Pseudodesulfovibrio mercurii
Pathway
ddn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DND132_0508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddn03400
]
DND132_0508
DNA repair and recombination proteins [BR:
ddn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DND132_0508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
DFRP_C
TMCO5
Motif
Other DBs
NCBI-ProteinID:
EGB13725
UniProt:
F0JFP7
LinkDB
All DBs
Position
complement(558895..561189)
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AA seq
764 aa
AA seq
DB search
MESRTFQVLEFPKILGALSGFAVSEPGASACLAIRPHDTLPAVRRAGTLFDQGAAWVRES
GFRMRPFPEVGGIFPHLDSELAVLDQDALFALKVILDLARDARDSLSGFEERGFDVLRDE
LFAYPWPQKTVSGITRCLDAEGQIKDESSPNLLTVRQEIRAIHQRCTKRVKDFILQENMA
SAMQDEFMTISSDRYVLPIKANFKNKTKGIIHDYSQTGETCYFEPIFLVETNNKLQELKR
EERAEEYKVLQYLTSLVRQEGDAVRGAYDGLVTLDVLTAKVRLADAYNGRTIEVVEEGAP
KLLKARHPLLALTDDAVHAVNIELLEGQRAMIVSGGNAGGKTVCLKTVGLIGLMAFSGLP
VPAAEGSRLPLWDDIFVIMGDEQSLEENVSTFTAQIKYLRRVWDKVDDRSLFILDEFGAG
TDPTQGAALAQAVIDSLLEKRATAFTATHFPALKAYAMATKGVRAASVLFDPSTKKPLFR
LAYDQVGASIALDVAREHGLPAAILERAEKYLLLDGSDTSAVLDRLNAMAVKKEAELDAI
EAEHARIEKKRATLEQKFEKERSKILKDVQAKAQEVVKQWKTERIGQKEARKKLHQARLR
IEDIIPERKEEPVFSFADIVPGKKVSYPAWNKSGTVLEINEKKKQAKVDIGGVAMWVKAE
HLGPADDPSWNARPAGPKLPAPSELVIEVDLRGRRADEALSELERALDDALRKGAGKMEI
VHGRGTGALRREVHEFLKYYPAVESFTLAPEDRGGDGMTEVTLK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagtccagaacattccaggtattggagttccccaagattcttggggcactgtccggt
ttcgccgtgtccgaacccggcgcttccgcgtgcctggccatccgcccccacgacaccctt
ccggccgtgcgccgggccgggaccctgttcgaccagggcgcggcctgggtgcgcgagtcg
ggcttccgcatgcgcccctttcccgaagtgggcggcatctttccgcacctggacagcgag
ctggccgtgctcgaccaggacgcgctcttcgccctgaaggtcatcctggacctggcccgc
gacgcccgcgactccctgtccggcttcgaggaacgcggcttcgacgtgctccgcgacgag
ctcttcgcctacccctggccccagaagaccgtgtccggcatcacccgctgcctggacgcc
gaaggacagatcaaggacgaaagttccccgaacctgctgaccgtgcgccaggagattcgg
gccattcaccagcgctgtaccaagcgggtcaaggacttcatcctccaggagaacatggca
tcggccatgcaggacgagttcatgaccatctcgtccgaccggtacgtgctgcccatcaag
gcgaatttcaagaacaagaccaaaggcatcatccacgactactcgcagaccggcgagacc
tgctacttcgagcccatcttcctggtggagaccaacaacaagctccaggaactcaagcgc
gaggagcgggccgaggaatacaaggtcctgcaatacctgacctccctggtacgccaggag
ggggacgcggtgcgcggggcctacgacggcctggtcaccctggacgtgctcacggccaag
gtccggttggccgacgcctacaacggccggaccatcgaggtggtcgaggagggcgcgccc
aagctcctcaaggcccgccatccgctcctggccctgaccgacgacgcggtccacgccgtg
aacatcgagctgctggaaggccagcgggccatgatcgtcagcggcggcaacgcgggcggc
aagaccgtctgcctcaagaccgtgggcctcatcggcctgatggccttttccggcctgccg
gtcccggccgcggagggcagccgcctgcccctgtgggacgacatcttcgtcatcatgggc
gacgagcagtccctggaggagaacgtctccaccttcaccgcccaaatcaaatacctgcgg
cgggtctgggacaaggtggacgaccgctccctgttcatcctcgacgagttcggcgcgggc
acggaccccacccagggcgcggccctggcccaggcggtcatcgactccctgctggaaaag
cgggccaccgcgttcacggccacccatttcccggcgctgaaggcctacgccatggccacc
aagggtgtgcgcgcggccagcgtgctcttcgacccgagcaccaagaagccgctctttcgc
ctggcctacgaccaggtgggcgcgtccatcgccctggacgtggcccgcgagcacggcctg
cccgccgccatcctggaacgggccgaaaaatatctcctgctggacggttcggacacctcc
gccgtgctggaccgtctcaacgccatggccgtgaagaaagaggccgaactggacgccatc
gaggcggagcacgcccgcatcgagaagaagcgggccacccttgagcaaaagttcgagaag
gaacgctccaagatcctcaaggacgttcaggccaaggcccaggaagtggtcaagcagtgg
aagaccgagcgcatcggccagaaagaggcgcgcaagaagctccaccaggcccgcctgcgc
atcgaggacatcatcccggaacgcaaggaggaacccgttttttccttcgcggatattgtc
ccgggcaagaaagtgtcgtatccggcatggaacaagtcgggcacggtgctggaaatcaac
gagaagaagaagcaggccaaggtggacatcggcggcgtggccatgtgggtcaaggccgag
catctcggcccggccgacgacccgtcgtggaacgccaggcccgccgggcccaagcttccg
gccccgagcgaactggtgatcgaggtggacctgcgcggacgcagggccgacgaggccctg
agcgagctggagcgggccctggacgacgccctgcgcaagggcgcgggcaagatggagatc
gtgcacggccgggggaccggggcgctcaggcgcgaggtgcacgagttcctcaagtattat
ccggcggtggagagtttcaccctggccccggaggaccggggcggggacggcatgaccgag
gtaacgctcaagtag
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