Pseudodesulfovibrio mercurii: DND132_0525
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Entry
DND132_0525 CDS
T01709
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
ddn
Pseudodesulfovibrio mercurii
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddn03032
]
DND132_0525
03036 Chromosome and associated proteins [BR:
ddn03036
]
DND132_0525
03400 DNA repair and recombination proteins [BR:
ddn03400
]
DND132_0525
DNA replication proteins [BR:
ddn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DND132_0525
Chromosome and associated proteins [BR:
ddn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DND132_0525
DNA repair and recombination proteins [BR:
ddn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DND132_0525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_1
DUF5666
Motif
Other DBs
NCBI-ProteinID:
EGB13741
UniProt:
F0JFR3
LinkDB
All DBs
Position
575346..575621
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIKALSEQKKMHVDEATKVVGAFVDSVKEALLRGDRVEIRGFGSFKIKDYEGYTG
RNPKTGTVVQVRPKKLPFFRPGKELKEYINQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagcgaattgatcaaggctctgtcagaacaaaagaaaatgcacgttgacgag
gccaccaaggtggtcggcgccttcgtggattccgtcaaggaagccctgcttcggggcgac
cgcgtggaaatccggggttttggcagcttcaagatcaaggactacgagggatacaccggg
cgcaatcccaagaccgggaccgtcgtccaggtccggcccaagaaacttcccttcttccgt
cccggcaaagagttgaaggaatacatcaaccagtag
DBGET
integrated database retrieval system
