Pseudodesulfovibrio mercurii: DND132_2170
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Entry
DND132_2170 CDS
T01709
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ddn
Pseudodesulfovibrio mercurii
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddn01011
]
DND132_2170
Enzymes [BR:
ddn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DND132_2170
Peptidoglycan biosynthesis and degradation proteins [BR:
ddn01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DND132_2170
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
LysM_RLK
BRCA-2_OB1
Motif
Other DBs
NCBI-ProteinID:
EGB15375
UniProt:
F0JI64
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Position
2408012..2409664
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AA seq
550 aa
AA seq
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MRVFNYAYLLAVGLLIASLAAGCAPKAPQETAPPVEEQVTENLVPEDAEALEPEIEAAPE
VTPGEDLTQTEQAVLNQRFGLLFDLESHENEEVELFFTYYNHKARKTMERWLERSQPYLP
YVRRVFTKYGLPQDLVLLPFVESGYNVRAYSWAGAGGMWQFMRGTGKLYGLTSDWWIDER
RDPYKATDAAARHLRDLYDKFGDWYLALAAYNAGEGKIARALKQANCDDFFELTEQNRKL
SRRNRLKLETRHYVPKFIAISKIFQNLDTLGFEPVSWDMEYELTEVKVPGGTDLLALARA
GGMTWSDFHDLNPAFRRQVSPPHMEATAYLPADKADKMIAYLAQPGAQPYAGYTRHRVRS
GDSWWVISRRYNVPINVLKSVNNTRSNTLRPGQYVMVPGNGSSRTAVVSAGDSPSASPAS
SASSSTAQTRAIAAKRGNYVVRSGDTLWSIAQSFNTTVATLKKSNGLRSNRLKVGQKLYI
PNSTDAATKQAVKDAEKVKTQVVNYKVRRGDNLYSISRKFGVKVSDLCHWNAISTKTTIY
AGQQLKVHVQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
ttgagagttttcaactatgcatatttactggcggtgggtctgctcatcgcgagcctggcc
gccggttgcgcccccaaggcgccccaggagacggcccctcccgtggaggaacaggtcacc
gagaacctcgtgccggaagacgccgaggccctcgagcccgagatcgaggccgctccggag
gtcactccgggcgaggacctgacccagaccgaacaggccgtgctcaaccagcgcttcggc
ctgctgttcgacctcgagtcccacgagaacgaggaggtcgagctcttcttcacctactac
aaccacaaggcgcgcaagaccatggagcgctggctggaacgttcccagccctacctgccc
tacgtgcgccgcgtgttcaccaagtacgggctgccccaggacctggtcctgctcccgttc
gtggagtccggctacaacgtccgggcctattcctgggccggagcgggcggcatgtggcag
ttcatgcgcggcacgggcaagctctacgggctgacgtccgactggtggatcgacgagcgc
cgcgacccctacaaggccacggacgcggccgcccggcacctgagggacctgtacgacaag
ttcggcgactggtacctggccctggccgcgtacaacgcgggtgagggcaagatcgcccgg
gccctgaaacaggccaactgcgacgacttcttcgaactgaccgaacagaaccgcaagctc
tcccggcgcaaccggctcaaactggaaacgcgccactacgtgcccaagttcatcgccatt
tccaagatcttccagaacctcgacaccctgggcttcgagcccgtgtcctgggacatggag
tacgaactgaccgaggtcaaggtgcccggcggcaccgacctcctcgccctggcccgggcc
gggggcatgacctggtcggacttccacgacctgaaccccgccttccgccgccaggtcagc
ccgccgcacatggaggccaccgcctacctgcccgcggacaaggcggacaagatgatcgcc
tacctggcccagcccggcgcgcagccctatgcgggctacacccgccaccgcgtgcgctcc
ggcgactcctggtgggtcatctcccggcgctacaacgtgcccatcaacgtgctcaagagc
gtgaacaacacccgctccaacaccctgcgccccggccagtacgtcatggtcccgggcaac
ggctcgagccggaccgccgtggtctctgcgggcgactccccgtcggcctccccggcgtcc
tcggcctcctcgtccacggcccagacccgggccatcgccgccaagcgcggcaactacgtg
gtccgctccggcgacaccctgtggtccatcgcccagtccttcaacaccacggtggccacc
ctcaagaagtccaacggattgcgctccaaccgcctcaaggtcggccagaagctgtacatc
cccaacagcacggacgcggccaccaagcaggccgtcaaggacgccgaaaaggtcaagacc
caggtggtcaactacaaggtccgccgcggcgacaacctctactccatctcccgcaagttc
ggcgtcaaggtctccgacctctgccactggaacgccatcagcaccaagaccaccatctac
gcgggccagcagctcaaggtccacgtccagtaa
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