Pseudodesulfovibrio mercurii: DND132_2285
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Entry
DND132_2285 CDS
T01709
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ddn
Pseudodesulfovibrio mercurii
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddn03032
]
DND132_2285
03400 DNA repair and recombination proteins [BR:
ddn03400
]
DND132_2285
Enzymes [BR:
ddn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DND132_2285
DNA replication proteins [BR:
ddn03032
]
Prokaryotic type
DNA Topoisomerases
DND132_2285
DNA repair and recombination proteins [BR:
ddn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DND132_2285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
BLI1
Motif
Other DBs
NCBI-ProteinID:
EGB15489
UniProt:
F0JIQ5
LinkDB
All DBs
Position
2534357..2536804
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AA seq
815 aa
AA seq
DB search
MSDTITIESELKKSYLEYSLSVIIGRAIPDVRDGLKPVHRRILYAMHDLGNYYNRAYKKS
ARVVGDVIGKYHPHGDSAVYDALVRLAQDFSMRDTLVDGQGNFGSIDGDSAAAMRYTEVR
MARLCSEFLGDIEKNTVDFAPNYDNTLQEPTVLPTKVPNLLLNGTTGIAVGMATNIPPHN
LGELIDGSVHLLDNPECTIESLMKRIKGPDFPTGGTIFGGQGLIDAYTTGRGSIKIRGVV
ELEEARKGHKESIIIKEIPYALNKSTLVEKIAALVHEKKIDGVADLRDESDRKGIRIVLE
LKRGAIADIIINSLYKFTPLETSFGINMMAVVGKRPMLLNLKEVLGHFLEHRREVIIRRT
KFDLDKCEKRVHILEGLRIALDNIDEVVKLIRASKTPEEARDGLMSRFSLSDIQAKAILD
MRLQKLTGLEHDKLLEELAELMKKIEYFKAILSNDEVLKGVIRDELNEIKTNYATPRKSE
LLRADLDSIDIEDLIPDEETVITLSRRGYIKRTPLSNYTAQKRGGKGIAGVQTGDGDFIH
TFMLTTNHQHLVLFTNFGKMFKIKVHQVPEGSRYAKGGHVNNLLPLDKDEHIATCLSLRE
FADDRFFLFVTKKGMIKRSSIGLYGNCRTTGIRAVNLRDHDELMDVREIEPEVDCILVSR
EGSAIRFNINDARPMGRATAGVKGMALRPNDEVVACVVTGDQERDQLLTVSEGGYGKRTT
IDQYRVQTRGGKGILNMRLTNKTGMVVGACMVNESDDVILLTSQNKIIRMSVSEVSQTRG
RATQGVRLVRMDDDNKVIGFDLVMDDDEDLGEVQA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacgatcaccatcgagagcgaactcaagaagagctatctcgagtactccctg
tccgtcatcatcgggcgcgccatcccggacgtgcgcgacgggctcaaaccggtgcaccgg
cgcattctctacgccatgcacgacctgggcaactactacaaccgcgcctacaagaagtcc
gcgcgcgtggtcggcgacgtcatcggcaaataccatccgcacggcgactcggcggtctat
gacgccctggtccggctggcccaggacttttccatgcgcgacaccctggtggacgggcag
ggcaacttcggctccatcgacggcgactccgcggccgccatgcgatacaccgaggtgcgc
atggcccggctctgctcggagttcctcggggacatcgagaagaacacggtcgatttcgcg
cccaactacgacaacaccctgcaggaaccgacggtcctgccgaccaaggtcccgaacctg
ctcctgaacggcaccacgggcatcgcggtgggcatggccacgaacatcccgccccacaac
ctgggcgagttgatcgacggctccgtgcacctgctcgacaatccggaatgcaccatcgaa
tcgctgatgaagcggatcaagggcccggacttccccacgggcgggaccatcttcggcggc
caggggctcatcgacgcctacaccaccgggcgcggctccatcaagatccgcggcgtggtc
gagctggaggaggcgcgcaaggggcacaaggaatccatcatcatcaaggagattccctac
gccctgaacaagtccaccctggtggagaagattgcggccctggtccacgaaaagaagatc
gacggcgtggccgacctgcgcgacgagtccgaccgcaagggcatccgcatcgtgctcgag
ctcaagcgcggggccatcgcggacatcatcatcaattcgctgtataagtttaccccgctg
gagaccagcttcggcatcaacatgatggccgtggtcggcaagcggcccatgctcctgaac
ctgaaggaggtcctgggccacttcctggagcaccggcgcgaggtcatcatccgccggacc
aagttcgacctggacaagtgcgagaagcgcgtccacatcctggaaggcctgcgcatcgcg
ctggacaacatcgacgaagtggtcaagctcatccgcgcgtccaagactccggaggaggcc
cgcgacggcctcatgagccgcttcagcctgtccgacatccaggccaaggccattctggac
atgcgcttgcagaagctgaccggcctggagcacgacaagctcctggaggaactggccgag
ctgatgaagaagatcgaatacttcaaggccatcctgtccaacgacgaggtgctcaagggc
gtgatccgcgacgaactgaacgagatcaagaccaactacgccaccccgcgcaagtccgag
ttgctccgggcggacctggactccatcgacatcgaggacctcatcccggacgaggagacg
gtcatcaccctgagccgccggggctacatcaagcgcaccccgctgtccaactacaccgcc
cagaagcgcggcggcaagggcatcgcgggcgtgcagaccggtgacggggacttcatccac
accttcatgctgaccaccaaccatcagcatctggtgctcttcaccaacttcggcaagatg
ttcaagatcaaggtccaccaggtgcccgaggggtcgcgctacgccaagggcgggcacgtc
aacaacctcctgcccctggacaaggacgagcacatcgccacctgcctgtccctgcgggag
ttcgcggacgaccgcttcttcctgttcgtgaccaagaagggcatgatcaagcgttcgtcc
atcggcctgtacggcaactgccggaccaccggcatccgcgccgtgaacctgcgcgatcac
gacgagctcatggacgtgcgcgagatcgagccggaagtggactgcatcctggtcagccgc
gagggctcggccatccgcttcaacatcaacgacgcccggcccatgggacgcgccacggcg
ggcgtcaagggcatggcgctcaggcccaacgacgaggtcgtggcctgcgtggtcaccggc
gaccaggagcgcgaccagctgctgaccgtcagcgagggcggctacggcaagcgcaccacc
atcgaccagtaccgggtccagacgcgcggcggcaagggcatcctgaacatgcgcctgacc
aacaagaccggcatggtcgtgggcgcgtgcatggtcaacgagtccgacgacgtcatcctg
ctgacctcccagaacaagatcatccgcatgtcggtgtccgaggtcagccagacgcgcggc
cgggccacccagggcgtgcggctggtgcgcatggacgacgacaacaaggtcatcggcttc
gacctggtcatggacgacgacgaagacctgggcgaggtccaggcctag
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