KEGG   Pseudodesulfovibrio mercurii: DND132_2575
Entry
DND132_2575       CDS       T01709                                 
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
ddn  Pseudodesulfovibrio mercurii
Pathway
ddn00550  Peptidoglycan biosynthesis
ddn01100  Metabolic pathways
ddn01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:ddn00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    DND132_2575
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    DND132_2575
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ddn01011]
    DND132_2575
Enzymes [BR:ddn01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     DND132_2575
Peptidoglycan biosynthesis and degradation proteins [BR:ddn01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   DND132_2575
SSDB
Motif
Pfam: Transpeptidase PBP_dimer DUF2442
Other DBs
NCBI-ProteinID: EGB15778
UniProt: F0JDA4
LinkDB
Position
complement(2866439..2868310)
AA seq 623 aa
MSDLYNESEQQAPRSGLVLLQALILGLFCLFAIRLWYLQIHRSDEYQAKALENQLRQESI
PSPRGLIRDRNGDLLAVNEPAYALGIIREDCPDVDRLVHQIAVWTGKDYFELKTLYNKNR
KRVKPFEPLIIVPDLTFAQLAVVETNKLRWPGLEIQFRPRRLYRYGTLLAHVLGYVAEAD
EEDLGARPDLALGDYVGKQGIELMLEDRMRGIKGLTQYQVDVNGRRLKERILKHPQAGHE
ISLSIDLELQKLCMDWLSEEAGGVAVMDADTGQLWALATAPSYDSNDFSSGLSPKQWAKL
RDDPLHPMQNRVIQSVYPPGSIFKHVVAGAGLRDGVDPKETTFCAGSMKLGRRVFRCWKR
GGHGKVDMNRALVESCDVYFYKLGRRLTVDRMSEFARAVGFGEKTGIRLPHEKAGNIPDQ
DWKLKRFGEPWQGGDNLNMAIGQGFTLVTPLQVVRFFAGIANGGRLLKPLLLKDEKTVVQ
ADIPLRPDQIEFLHQALVDTVEDPHGTCRRIRTKGVVVGGKTGTAQVVRLTDELKELKDD
QIPYRFRDHAWMAAIAEKDGRRFAIACLVEHGLHGGSGAGPIIKAVIDYLFEGKITPNPE
DRKAKARAVRALSLKHKEKRNAD
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgtcagacctctataacgaatccgaacagcaggccccgcgctcgggcctggtcctgctc
caggcgctcatcctggggctcttctgcctgttcgccatccgcctgtggtacctccagatc
caccgcagcgacgaataccaggccaaggccctggagaaccagctgcgccaggagtccatc
ccctcgccgcgcgggctcatccgcgaccgcaacggcgacctcctggccgtgaacgagccc
gcctacgcgctgggcatcatccgcgaggactgcccggacgtggaccgtctggtgcaccag
atcgcggtctggaccggcaaggactacttcgagctcaagaccctgtacaacaagaaccgc
aagcgggtgaaacccttcgagccgctgatcatcgtcccggacctgaccttcgcccagctg
gccgtggtcgagaccaacaagctgcgctggcccggcctggagattcagttccggccccgg
cggctgtaccgctacggcaccctgctcgcgcacgtgctcggctacgtggccgaggcggac
gaggaggacctgggcgcccggcccgacctggcgctcggcgactacgtgggcaagcagggc
atcgagctgatgctcgaggaccgcatgcgcggcatcaaggggctgacccagtaccaggtg
gacgtcaacggccgccgcctcaaggagcggatcctcaagcacccccaggccggacacgaa
atctccctgtccatcgacctggagctgcagaagctgtgcatggactggctgtccgaggag
gcgggcggcgtggccgtcatggacgccgacaccggccagctgtgggccctggccacggcc
ccgtcctacgactccaacgacttttcctcgggcctgagccccaagcagtgggccaagctc
cgggacgaccccctgcaccccatgcagaaccgggtcatccagtcggtctacccgccgggc
tccatcttcaagcacgtggtcgccggggccgggctgcgcgacggcgtggaccccaaggag
accaccttctgcgccgggtccatgaagctcggccgccgggtcttccgctgctggaagcgg
ggcggccacggcaaggtggacatgaaccgcgccctggtcgagtcctgcgacgtctatttc
tacaagctcggcaggcggctgaccgtggaccgcatgagcgagttcgcccgggccgtgggc
ttcggcgagaagaccggcatccgcctgccccacgagaaggcgggcaacatcccggaccag
gattggaagctcaagcggttcggcgagccctggcagggcggcgacaacctgaacatggcc
atcggccaggggttcaccctggtcacgccgctccaggtggtccgcttcttcgcgggcatc
gccaacggcggcaggctgctcaagcccctgctactcaaggacgagaagaccgtggtccag
gcggacatccccctgcggcccgaccagatcgagttcctgcaccaggccctggtggacacc
gtggaggacccccacggcacctgccgccgcatccgcaccaagggcgtggtcgtgggcggc
aagaccggcacggcccaggtggtccggctgaccgacgagctcaaggagctcaaggacgac
cagatcccctaccgcttccgggaccacgcctggatggcggccatcgccgagaaggacggg
cggcgcttcgccatcgcctgcctggtggagcacggcctgcacggcgggtccggggccgga
cccatcatcaaggcggtcatcgactacctcttcgagggcaagatcacgcccaaccccgag
gaccggaaggccaaggcccgggccgtgcgcgccctgtccctcaagcacaaggagaaacgc
aatgccgattga

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