Pseudodesulfovibrio mercurii: DND132_2575
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Entry
DND132_2575 CDS
T01709
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ddn
Pseudodesulfovibrio mercurii
Pathway
ddn00550
Peptidoglycan biosynthesis
ddn01100
Metabolic pathways
ddn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DND132_2575
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DND132_2575
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddn01011
]
DND132_2575
Enzymes [BR:
ddn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DND132_2575
Peptidoglycan biosynthesis and degradation proteins [BR:
ddn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DND132_2575
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF2442
Motif
Other DBs
NCBI-ProteinID:
EGB15778
UniProt:
F0JDA4
LinkDB
All DBs
Position
complement(2866439..2868310)
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AA seq
623 aa
AA seq
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MSDLYNESEQQAPRSGLVLLQALILGLFCLFAIRLWYLQIHRSDEYQAKALENQLRQESI
PSPRGLIRDRNGDLLAVNEPAYALGIIREDCPDVDRLVHQIAVWTGKDYFELKTLYNKNR
KRVKPFEPLIIVPDLTFAQLAVVETNKLRWPGLEIQFRPRRLYRYGTLLAHVLGYVAEAD
EEDLGARPDLALGDYVGKQGIELMLEDRMRGIKGLTQYQVDVNGRRLKERILKHPQAGHE
ISLSIDLELQKLCMDWLSEEAGGVAVMDADTGQLWALATAPSYDSNDFSSGLSPKQWAKL
RDDPLHPMQNRVIQSVYPPGSIFKHVVAGAGLRDGVDPKETTFCAGSMKLGRRVFRCWKR
GGHGKVDMNRALVESCDVYFYKLGRRLTVDRMSEFARAVGFGEKTGIRLPHEKAGNIPDQ
DWKLKRFGEPWQGGDNLNMAIGQGFTLVTPLQVVRFFAGIANGGRLLKPLLLKDEKTVVQ
ADIPLRPDQIEFLHQALVDTVEDPHGTCRRIRTKGVVVGGKTGTAQVVRLTDELKELKDD
QIPYRFRDHAWMAAIAEKDGRRFAIACLVEHGLHGGSGAGPIIKAVIDYLFEGKITPNPE
DRKAKARAVRALSLKHKEKRNAD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacctctataacgaatccgaacagcaggccccgcgctcgggcctggtcctgctc
caggcgctcatcctggggctcttctgcctgttcgccatccgcctgtggtacctccagatc
caccgcagcgacgaataccaggccaaggccctggagaaccagctgcgccaggagtccatc
ccctcgccgcgcgggctcatccgcgaccgcaacggcgacctcctggccgtgaacgagccc
gcctacgcgctgggcatcatccgcgaggactgcccggacgtggaccgtctggtgcaccag
atcgcggtctggaccggcaaggactacttcgagctcaagaccctgtacaacaagaaccgc
aagcgggtgaaacccttcgagccgctgatcatcgtcccggacctgaccttcgcccagctg
gccgtggtcgagaccaacaagctgcgctggcccggcctggagattcagttccggccccgg
cggctgtaccgctacggcaccctgctcgcgcacgtgctcggctacgtggccgaggcggac
gaggaggacctgggcgcccggcccgacctggcgctcggcgactacgtgggcaagcagggc
atcgagctgatgctcgaggaccgcatgcgcggcatcaaggggctgacccagtaccaggtg
gacgtcaacggccgccgcctcaaggagcggatcctcaagcacccccaggccggacacgaa
atctccctgtccatcgacctggagctgcagaagctgtgcatggactggctgtccgaggag
gcgggcggcgtggccgtcatggacgccgacaccggccagctgtgggccctggccacggcc
ccgtcctacgactccaacgacttttcctcgggcctgagccccaagcagtgggccaagctc
cgggacgaccccctgcaccccatgcagaaccgggtcatccagtcggtctacccgccgggc
tccatcttcaagcacgtggtcgccggggccgggctgcgcgacggcgtggaccccaaggag
accaccttctgcgccgggtccatgaagctcggccgccgggtcttccgctgctggaagcgg
ggcggccacggcaaggtggacatgaaccgcgccctggtcgagtcctgcgacgtctatttc
tacaagctcggcaggcggctgaccgtggaccgcatgagcgagttcgcccgggccgtgggc
ttcggcgagaagaccggcatccgcctgccccacgagaaggcgggcaacatcccggaccag
gattggaagctcaagcggttcggcgagccctggcagggcggcgacaacctgaacatggcc
atcggccaggggttcaccctggtcacgccgctccaggtggtccgcttcttcgcgggcatc
gccaacggcggcaggctgctcaagcccctgctactcaaggacgagaagaccgtggtccag
gcggacatccccctgcggcccgaccagatcgagttcctgcaccaggccctggtggacacc
gtggaggacccccacggcacctgccgccgcatccgcaccaagggcgtggtcgtgggcggc
aagaccggcacggcccaggtggtccggctgaccgacgagctcaaggagctcaaggacgac
cagatcccctaccgcttccgggaccacgcctggatggcggccatcgccgagaaggacggg
cggcgcttcgccatcgcctgcctggtggagcacggcctgcacggcgggtccggggccgga
cccatcatcaaggcggtcatcgactacctcttcgagggcaagatcacgcccaaccccgag
gaccggaaggccaaggcccgggccgtgcgcgccctgtccctcaagcacaaggagaaacgc
aatgccgattga
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