Pseudodesulfovibrio mercurii: DND132_2765
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Entry
DND132_2765 CDS
T01709
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ddn
Pseudodesulfovibrio mercurii
Pathway
ddn03030
DNA replication
ddn03430
Mismatch repair
ddn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DND132_2765
03430 Mismatch repair
DND132_2765
03440 Homologous recombination
DND132_2765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddn03032
]
DND132_2765
03400 DNA repair and recombination proteins [BR:
ddn03400
]
DND132_2765
Enzymes [BR:
ddn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DND132_2765
DNA replication proteins [BR:
ddn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DND132_2765
DNA repair and recombination proteins [BR:
ddn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DND132_2765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
DUF6282
tRNA_anti-codon
DNA_pol_IIIA_C
DUF4447
Motif
Other DBs
NCBI-ProteinID:
EGB15968
UniProt:
F0JJ69
LinkDB
All DBs
Position
complement(3077104..3080658)
Genome browser
AA seq
1184 aa
AA seq
DB search
MAEFVHLHVHTEYSLLDGAIRINDLLTRAKDLGMPAVAITDHGSMFGAVVFYMAAKELGI
KPIIGCEVYVAEGDVDDEEAHLRKEHGGGYHLILLAKNQRGYKNLIKLVSTGYLDGFYYK
PRVSKHLLKKYSEGLIALSACLAGEIPRKLMNEGLEAGADMARTYESIFPGNFYLELQDN
GIGKQTRLNELLVKCAEKTGLPLVATNDCHYLTAEDFEAHDTLLCIQTQTTVDAEKRFRM
ETKELYFKTPEEMEKAFAHVPEAILNTQRIAEQCNLEIELGNYYFPEYKLPEGVSMNEEF
ERLCREGLQRRLNTITYEVDEGKYWKRLDYELGVIKQMGFPAYFLIVQDFINWAKDHRIP
VGPGRGSAAGSIVAWSLKITNLDPLPYDLLFERFLNVERVSMPDIDVDFCERRRLEVVKY
CAEKYGVDRVAQITTFGTMKTKAVIKDVGRALGMSFGETDRIAKLIPDDPAVMAKLLGVE
KAKITVPNAVKAVTELDDMVATDPKVAKLIDISTRLEGLCRHASTHAAGVVISNKPMTEY
LPLYKGKKGEIVTQFDMKKVEKVGLIKFDFLGLRTMTVIEDCLDIIREQGKKAPDLETLH
LDDPETFAIFAKGDTDGIFQVESSGMRKYLRMLGPDCFEDIVAMLALYRPGPLGMIGSHG
VSMVDEFIMRKHGEIAVTYPHPSLEETLKPTYGVMVYQEQVMATAMVIANYSLGEGDLLR
RAMGKKIAEEMAKQRSRFLEGSRENGIDDAVANDIFDTMEKFAAYGFNKSHSAAYALISY
HTAYLKAHFPVEFMAALMSTEMNNTDKIIMYVNACRDMDITVRQPDINAGQARFSVKNGE
ILFAMAAIKNVGEEAINEIVAERAEQGPFLNIFDFCERVNLRRVTKRVLESLIKAGALDC
FSCSRAALLEDLDKAVALGQKKAKEKESGMLNMLDLLGGGGKSDATAQPTCSLCEEFEDR
EKLQLEKEVLGFFLSGHPLLAYRHDMQRLRTVTLEDCKTIPNGTEVRVAVIIPDFKQHIT
RKGDPMAFCNAEDLTTYGEITMLPNVYAEARELLDADRPLLVQGKIDQRDDQPGPEDAPK
SAKILADKVVYLADAVQGSDQPVSLWIGEKHAEDGHLNALKAILKRYPGTTSVNLGIITR
EAVVNLRLGNGWKVYPGRDFWKEVEAWQNGDARTYRAEAEAELL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaattcgttcatcttcacgtccatactgaatacagcctgctggacggcgccatc
cgcatcaacgacctgctgaccagggccaaggacctgggcatgcccgccgtggccatcacc
gaccacgggtccatgttcggggccgtggtcttctacatggccgccaaggagctgggcatc
aagccgatcatcggctgcgaggtgtacgtggccgagggcgacgtggacgacgaggaggcc
cacctgcgcaaggagcacggcggcggctaccacctgatcctcctggccaagaaccagcgc
ggatacaagaacctgatcaagctggtctccaccggctacctggacggcttctactacaag
ccgcgcgtcagcaagcacctgctcaagaagtactccgaggggctcatcgccctgtccgcc
tgcctggcgggcgaaatcccgcgcaagctcatgaacgagggtctcgaggcgggcgcggac
atggcccggacctacgagtccatcttccctggcaacttctacctggaactccaggacaac
ggcatcggcaagcagacgcggctcaacgagctgctcgtcaagtgcgccgagaagaccggc
ctgcccctggtggccaccaacgactgccactacctgaccgccgaggacttcgaggcccac
gacaccctgctgtgcatccagacccagaccacggtggacgcggaaaagcgcttccgcatg
gagacgaaggagctctatttcaagaccccggaggagatggagaaggcctttgcccacgtg
cccgaggccatcctgaacacccagcgcatcgccgagcagtgcaacctcgagatcgagctg
ggcaactactatttcccggaatacaagctgcccgaaggcgtgtccatgaacgaggagttc
gagcggctgtgccgcgagggcctccagcgccgcctgaacaccatcacctacgaggtggac
gagggaaaatactggaagcggctggactacgagctgggggtcatcaagcaaatgggcttc
ccggcctacttcctcatcgtccaggacttcatcaactgggccaaggaccaccgcatcccg
gtgggccccggccgaggctcggccgccgggtccatcgtggcctggtcgctgaagatcacc
aacctcgaccccctgccctacgacctgctcttcgagcgcttcctgaacgtggagcgcgtg
tccatgcccgatatcgacgtggacttctgcgagcgccgccggctggaggtggtcaagtac
tgcgccgagaagtacggcgtggaccgggtggcccagatcaccaccttcgggaccatgaag
accaaggcggtcatcaaggacgtgggccgggcgctcggcatgtccttcggcgagaccgac
cgcatcgccaagctcatcccggacgacccggcggtcatggccaagctgctcggcgtggaa
aaggccaagatcaccgtgcccaacgcggtcaaggccgtgaccgagctggacgacatggtc
gccaccgaccccaaggtggcgaaactcatagatatttcaacgcgcctcgaaggcctgtgc
cgccacgcctcgacccacgcggcgggcgtggtcatctcgaacaagcccatgaccgagtac
cttccgctgtacaaggggaagaagggcgaaatcgtgacccagttcgacatgaagaaggtc
gagaaggtcgggctgatcaagttcgacttcctggggctgcgcaccatgacggtcatcgag
gactgcctggacatcatccgcgagcagggcaagaaggccccggacctggagaccctgcac
ctggacgaccccgagaccttcgccatcttcgccaagggcgacacggacggcatcttccag
gtggagtcgtcgggcatgcgcaagtacctgcgcatgctgggcccggactgcttcgaggac
atcgtggccatgctcgccctgtacaggcccggccccttgggcatgatcggctcccacggc
gtgtccatggtcgacgagttcatcatgcgcaagcacggcgagatcgcggtcacctacccg
cacccgtcgctggaggagaccctcaagcccacctacggggtcatggtctaccaggagcag
gtcatggccacggccatggtcatcgccaactactccctgggtgaaggcgacctgctgcgc
cgggccatgggcaagaagatcgccgaggagatggccaagcagcgctcccggttcctggag
ggctcgcgcgagaacggcatcgacgacgccgtggccaacgacatcttcgacaccatggag
aagttcgcggcctacggcttcaacaagtcccactcggccgcctacgcgctcatctcctac
cacaccgcctacctcaaggcccatttcccggtggagttcatggccgcgctgatgtccacg
gaaatgaacaacaccgacaagatcatcatgtacgtcaacgcctgccgcgacatggacatc
accgtccgccagccggacatcaacgcgggccaggcgcgcttttcggtcaagaacggggag
attctcttcgccatggcggccatcaagaacgtgggcgaggaggccatcaacgagatcgtg
gccgagcgcgcggagcaaggccccttcctgaacatcttcgacttctgcgagcgggtgaac
ctgcgccgcgtgaccaagcgggtcctggagtcgctcatcaaggcgggcgccctggactgc
ttctcctgctcgcgggccgccctgctcgaggacctggacaaggccgtggccctgggccag
aaaaaggccaaggagaaggagtcgggcatgctcaacatgctggacctgctcggcgggggc
ggcaaatccgacgcgaccgcgcagcccacctgctccctgtgcgaggagttcgaggaccgc
gaaaagctccagctggaaaaggaggtcctcggctttttcctgtccggccacccgctcctg
gcctaccgccacgacatgcagcggctgcgcaccgtgacgctggaggattgcaagaccatc
cccaacggcaccgaggtgcgcgtggccgtgatcatcccggatttcaaacagcacatcacc
cgcaagggcgaccccatggccttctgcaacgccgaggacctgaccacctacggcgagatc
accatgctgcccaacgtctacgccgaggcgcgcgagctgctcgacgcggaccgccccctg
ctggtccagggcaagatagaccagcgcgacgaccagcccggccccgaggacgcgcccaag
tccgccaagatcctggccgacaaggtcgtgtacctggccgacgcggtccagggctcggac
cagccggtctccctgtggatcggcgaaaagcatgcggaggacgggcatctcaacgccctg
aaggcgatcctcaagcgctacccgggcaccaccagcgtgaacctgggcatcatcacccgc
gaggccgtggtcaacctgcggttgggcaacggctggaaggtctatcccggccgcgacttc
tggaaggaggtcgaggcctggcagaacggcgacgccaggacctatcgcgccgaggccgag
gccgaactcctttag
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