KEGG   Pseudodesulfovibrio mercurii: DND132_3118
Entry
DND132_3118       CDS       T01709                                 
Name
(GenBank) CRISPR-associated HD domain protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ddn  Pseudodesulfovibrio mercurii
Brite
KEGG Orthology (KO) [BR:ddn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ddn02048]
    DND132_3118
Enzymes [BR:ddn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DND132_3118
Prokaryotic defense system [BR:ddn02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    DND132_3118
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Cas3_HD HD AAA_22 Helicase_C PhoH
Other DBs
NCBI-ProteinID: EGB16321
UniProt: F0JK72
LinkDB
Position
3484085..3486250
AA seq 721 aa
MAIYAHSRENSDPEEWQLLEEHLRNVADRGADFAAAFGAADWARVLGAFHDIGKRNPRFQ
QRLTGENTGHADHKGAGARLFENLGTGFGRMAAYCIAGHHGGLPDFHDSGHGTSLGRILE
RAFVLPGRDVPDGIRPPDWPFTPESGFQCSFFTRMLFSSLVDADFLDTEAFMDAAESGRR
EPGPALGELRELLDRHLAAFAGEGRINSLRAEILSHCREKAALDPGLFTLTVPTGGGKTL
TSMAFALDHALRHGLRRVVYVIPYTSIIEQNARVFRDIFPAGAVIEHHSNFDPRNAFGDE
DNARESAGARRHRLACENWDAPVVVTTNVQFFESLFAAKTSRCRKLHNLAGSVIVLDEAQ
MLPVDFLAPCLRALEELAAHYGCSVVLCTATQPALRREDFAPGLAGLDGRELAPDPARLH
EAFRRTELRDLGELELSEVADMVREREQVLCIVNTRARASELFKLVRDEPGARHLSALMC
PAHRSERLAEIRGMLRAGEPCRVVSTQLVEAGVDVSFPEVVREMAGLDSITQAAGRCNRE
GERDEAAPVSVFYPAEGLPRAFSAQAEHAAAVLRGPHGGDPFSPEAIRQYFGLHYWLKRE
RLDRKRILDALSNERGEWYFRRAADEFRLIDNPMVPLVVPWDGRARELVEALRYAEHPGG
ILRKLQQYTVQVYERQFRALDEAGAVETVADGCEALCRMEFYDDLFGLRVPGPTDPEYFL
A
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggccatctatgcgcattccagggaaaactcggacccggaagagtggcagctgcttgag
gagcatctgcgcaatgtggcggacaggggggcggatttcgccgccgccttcggcgctgcg
gattgggcgcgggtcctcggggcgttccacgacataggcaagcggaacccccgctttcag
cagaggctgaccggcgaaaacaccggccacgccgaccacaagggggccggggcgcggctg
ttcgaaaatctgggcaccggtttcgggcgcatggccgcctactgcattgccgggcaccac
ggaggactgccggacttccatgattccggccatggaacctcgctggggcggatccttgaa
cgggccttcgtcctgccgggccgcgacgtcccggacggcatccggccgcccgactggcct
ttcacgccggaaagcggctttcagtgttcctttttcacacgcatgctcttctcctccctg
gtggacgcggactttctggacaccgaggccttcatggacgcggcggagagcggtcgtcgc
gagcccggtcctgcgctcggcgagctgcgcgaactcctggacaggcacctggccgcgttc
gccggggaggggcgcatcaattccctgcgcgcggagatcctgtcccattgccgggaaaag
gcggccctcgaccccggcctgttcaccctgaccgtgcccaccggaggcggcaagaccctg
acctccatggccttcgccctggatcacgccctgcggcacggcctgcgccgggtggtttac
gtcatcccctatacctccatcattgagcagaacgcgcgtgttttccgggacatcttcccc
gcaggcgcggtcatcgagcaccatagcaacttcgacccgcgcaacgccttcggcgacgag
gacaacgcccgcgaatccgccggagcccgccgccaccggctggcctgcgagaactgggac
gcccccgtggtcgtgaccaccaacgtgcagttcttcgagtcgctgttcgcggccaaaacc
tctcgctgccgcaaactgcacaacctggccgggtcggtcatcgtcctggacgaggcccag
atgctgcccgtggacttcctggccccgtgcctgcgggctcttgaggagctggccgcgcac
tacgggtgcagcgtggtcctgtgcacggccacccagcccgccctgcgccgagaggatttc
gcgccgggcctggccgggctcgacggccgggagctggccccggacccggcccggctgcat
gaggccttccggcgcacggagctgcgcgacctcggcgaactggagctgtccgaggtggcc
gacatggtgcgggagcgggagcaggtcctttgcatcgtcaacacccgcgcccgcgcgtcc
gagttgttcaagttggtccgtgacgagcctggggcgcgccacctgagcgccctcatgtgc
ccggcccaccgctcggagcggctggccgagatcagggggatgctgcgcgccggggagccg
tgccgggtggtctccacccagcttgtcgaagccggggttgacgtctcctttcccgaggtc
gtccgcgagatggccgggctcgattccatcacccaggccgccgggcggtgcaatcgggag
ggcgagcgcgatgaagcggccccggtgtccgtgttctatccggccgaagggctgccgcgt
gccttttcggcccaggcggagcatgcggcggccgtcctgcgcgggccccacggcggcgac
ccgttctcgcccgaggccatccggcagtatttcggcctgcactactggctcaagcgggag
cgcctggaccggaagcggattctggacgccctgagcaacgagcggggggagtggtatttc
cgtcgggcggcggacgaattccggctcatcgacaatcccatggtcccgttggtcgtgccc
tgggacggccgggcgcgggagctggtggaggcgctgcggtacgcggaacaccccggcggc
atcctgcgcaaactccagcagtacacggtccaggtctacgagcgccagttccgcgccctg
gacgaggccggggcagtggagacggtcgccgacgggtgcgaggcgctctgtcggatggag
ttctacgacgatctgttcggtctgcgggtgcccggtccgaccgatccggagtattttttg
gcatag

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