KEGG   Pseudodesulfovibrio mercurii: DND132_3156
Entry
DND132_3156       CDS       T01709                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ddn  Pseudodesulfovibrio mercurii
Brite
KEGG Orthology (KO) [BR:ddn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ddn02048]
    DND132_3156
Enzymes [BR:ddn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     DND132_3156
Prokaryotic defense system [BR:ddn02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   DND132_3156
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 ResIII HSDR_N DEAD CC190 OmpH
Other DBs
NCBI-ProteinID: EGB16359
UniProt: F0JKB0
LinkDB
Position
complement(3532563..3535592)
AA seq 1009 aa
MTEQQIEQGLIGELTDLKYTYRDDIRDRATLESNFREHFQALNRVQLTDGEFKRLLDEII
SPDVFTAATMLREINDFTRDDGTPLNYTLVNIKDWCKNTFEVVNQLRINTDNSFQRYDVM
LLINGIPVVQIELKTLGISPRRAMQQIVDYKKDPGNGYTKTLLCFVQLFIVSNQTETYYF
ANNNDRHFAFDADESFLPIYQHADEDNNKITHLSDFAESFLPKCTLATTINRYMVLVASE
RKMLMMRPYQIYAVKNIDQSIRENRGNGYVWHTTGSGKTLTSFKASTLLKLNPDIHKCLF
VVDRKDLDRQTREEFNRFQEGCVEENTNTAALVRRLISDDYADKVIVTTIQKLGLALDET
SKYNKSDKKNGKATFKERLEPLRDKRMAFIFDECHRSQFGQTHQTIKNFFPKAQLFGFTG
TPIFPENATTRQIDGNIQTLRTTKDLFQNEFPAYTITNAIEDKNVLRFHVDYFKPDGENL
PKPGTPVAKRAVIDAILAKHDAATGERRFNAIFATASINDAIEYYELFKQIQAEHQAADT
DYVPVRVAAVFSPPAEGNPDVKQLQEDLPQELEDNQQEPEKKKEALKAIIADYNASYGTN
HSIGEFDAYYQDVQQRIKDQKFPNRDLPKKGAEKIDITIVVDMLLTGFDSKYLNTLYVDK
NLRYHGLIQAFSRTNRVLNSAKPYGHILDFRGQRDRVDEAIRLFSGARAEQAREIWLVDE
APVVIEQLKAAKQELDDFLQSQGLDPRPEAVPNLKGDEARAAFVKQFKEIQRLTTQLDQY
TDLTEEQRKEIEQALPKDDARAFRGVYLETAKRLKARQDKAGGSATVGDSDRATQDVIDQ
LDFEFVLFASADIDYDYIMSLISRFSGQAPGQQEMKREELVRLIRSDAKFMGELDEITEY
VRTLETGKPLTEEDVRVGYQIFKGERHASELAAIAHKHGLTNEALQTFVDAILDRMIFDG
EQLTDLLEPLDLGWRERREKELALMDDLVPLLKKRADGRAISGLNAYEQ
NT seq 3030 nt   +upstreamnt  +downstreamnt
atgacagaacaacaaatagagcaaggcttgatcggcgaactgactgatcttaaatacaca
tatcgcgacgacatccgcgaccgcgctacccttgaaagcaactttcgcgagcattttcag
gccctcaaccgcgtccagctcaccgacggcgaattcaaacgtctcctcgatgaaattatc
tctcccgacgtcttcaccgccgctaccatgctccgcgagatcaatgattttacccgtgat
gacggaaccccgctcaactacaccctcgtgaacatcaaggactggtgcaaaaacactttc
gaagtcgttaaccagctccgcatcaacactgacaacagcttccaacgctacgacgtgatg
ttgctgatcaacggcatccccgttgttcagatcgaactcaagaccctcggcatcagcccc
cgccgggccatgcagcagatagtggactacaagaaagaccccggcaacggctataccaag
accctgctctgtttcgttcagctcttcatcgtctccaaccagaccgagacctattatttc
gccaacaacaacgaccgccattttgctttcgacgccgatgaaagttttctgcccatctac
caacacgcggatgaagacaataacaagatcacacacctgagtgacttcgccgagtccttt
ctgcccaagtgcacccttgccacgacgatcaaccgctacatggtcctcgtcgcatcagag
cggaagatgctcatgatgcgcccctaccagatatacgccgtcaagaacatcgaccaaagc
atccgtgaaaaccgggggaacggctatgtctggcataccacaggctcgggcaagaccctc
acctccttcaaggcctccacgctcctcaaactcaatcccgacatccacaagtgcctcttt
gtcgtcgaccgcaaagacctcgaccgtcagacccgcgaagagttcaaccgcttccaggag
ggctgcgtcgaggaaaacaccaacaccgccgcccttgtacgccgccttatctccgacgac
tatgctgacaaagtcatcgtcacgaccattcagaagcttggcctcgccctcgacgaaacc
agcaaatacaacaagtccgacaaaaagaatgggaaggccaccttcaaggaacgccttgaa
ccgctcagggacaagcgtatggcttttatcttcgatgagtgccaccgctctcagttcggc
cagacccaccagaccatcaaaaatttcttccccaaggcacagctcttcggcttcaccggc
acgccgatctttcccgagaacgccactacccggcagatcgatggaaatatccagacgctc
cgcaccaccaaggacctttttcaaaacgaattccctgcttacaccatcaccaacgccatc
gaggacaagaacgtccttcgttttcatgtcgactacttcaaacctgacggagagaacctg
cccaagcccggcacccccgtcgccaaacgtgccgttatcgacgcaatcctagccaaacac
gacgcggctaccggcgagcgccgtttcaacgcgatcttcgccaccgcctcgatcaacgac
gccatcgaatactacgagcttttcaagcagattcaggccgagcaccaggcagccgataca
gactatgtcccggtcagagttgccgccgtcttctctccgccagcagagggcaatcccgac
gtcaagcagcttcaggaagacctgccccaggagcttgaagataaccagcaggagccggaa
aagaaaaaggaagccctcaaggccatcatcgccgactacaacgccagctatggcacgaat
cattccattggcgagttcgacgcatactaccaggacgtccagcagcgcataaaggaccag
aaattccccaaccgagacctccccaaaaagggcgcggaaaagatcgacatcactattgtt
gtcgacatgctcctgaccggttttgactctaagtacctgaacaccctctacgtcgacaag
aacctcaggtatcacggcctgatccaggcattttcccgcactaaccgcgtccttaactcg
gcaaagccttacggccacatccttgacttccgtgggcagcgggacagggtcgatgaagct
atccgtctgttctccggcgcaagggccgaacaggcgagggaaatctggctggtcgacgag
gcccccgtggtcatagagcaactcaaggccgccaagcaggaactcgacgacttcctccag
tctcaaggcctcgacccgcgtcccgaagccgtccccaacctcaagggtgacgaggcccgc
gccgcctttgtcaagcagtttaaagagattcagcgtcttacgactcagcttgaccagtac
accgacctcactgaagagcaacgtaaggagattgagcaggcccttcccaaggacgatgcc
cgggctttccgtggcgtctacctcgaaaccgccaaacgcctcaaagccaggcaggacaaa
gcaggaggcagtgcaacagtcggagacagcgacagggccacgcaggacgtaatcgaccag
ctcgatttcgagttcgtcctcttcgcctccgccgacattgattatgactacatcatgagc
cttatctcccgcttcagcggacaggcgccgggtcaacaggaaatgaaacgagaagagctc
gttcgcctcattcggtccgacgcgaagttcatgggcgaactcgacgagattacggagtac
gtacggacgctcgaaaccggcaaaccccttaccgaagaagatgttcgtgtcggctaccaa
atcttcaaaggagaacgccacgcatctgaactcgcagctatagcccacaagcacgggctg
acgaacgaagcgctgcaaacctttgtggatgccatcctcgaccgtatgatttttgacggc
gaacagctcactgatctcctggaacctctcgacctgggctggcgcgaacggcgcgagaaa
gaactggcgctgatggacgatctggtaccgcttttgaaaaaacgcgcagacggccgggct
atctccggattgaacgcatatgagcagtaa

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