Dokdonia donghaensis: I597_0022
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Entry
I597_0022 CDS
T04309
Symbol
topA_1
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ddo
Dokdonia donghaensis
Brite
KEGG Orthology (KO) [BR:
ddo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddo03032
]
I597_0022 (topA_1)
03400 DNA repair and recombination proteins [BR:
ddo03400
]
I597_0022 (topA_1)
Enzymes [BR:
ddo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I597_0022 (topA_1)
DNA replication proteins [BR:
ddo03032
]
Prokaryotic type
DNA Topoisomerases
I597_0022 (topA_1)
DNA repair and recombination proteins [BR:
ddo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I597_0022 (topA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
ANH58965
UniProt:
A0A0A2GV72
LinkDB
All DBs
Position
complement(19842..22367)
Genome browser
AA seq
841 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDYKVESSFGHIADLPSKELGVDVDGDFTPKYKVSDDK
KKVVRNLKSLANKAEMVWLASDEDREGEAIAWHLEQELGLTPDRTKRIVFHEITKTAILR
AIENPRKIDYDLVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
EVLGFEPKASYRVDAEFTTQDGKSFKAKLPKNITTKKQAKAFLEKNLSATFKVDALTKKP
AKKSPAPPFTTSTLQQEASRKLYFSVSKTMTMAQRLYEAGHITYMRTDSVNLSKDAKAGA
EAEIVAAYGKEFHKERNYKGKSKGAQEAHEAIRPTDFSKHSVNMDRDQIRLYELIWKRAI
ASQMSEAQLERTNVQIASSAGTDNFTANGEILKFEGFLKVYLEGSDDEDVEETGLLPDLK
TGEALLNKYITATERFTRPPYRYTEASLVKKLEELGIGRPSTYAPTITTIQNRKYVEKGT
VEGKERSYDVLSLENNEIKDRTLTETVGSDKGKLVPTDVGMVVNDFLVQHFENILDYNFT
AKVEADFDDIAEGKQEWTKMMKDFYKDFHPHVKDVEKNAEREVGERILGEDPATGKPVSV
RLGKFGPMVQIGSVEDEEKPRFASLGPDQTLSNITYEQAMDLFKLPKDLGMFEEEEVSVN
NGRFGPYVKFGKTFVSLPKGRDPMDVDLDEAIVYIKEKQKADAPIYMYEDLPVQKGTGRF
GPYIKWNGMFINVNKKYDFDNLSDEDIVELIEVKKQKEIDKVLQDFPEEGIRVEKARWGR
SNIIKGKLKIELSKDIDAAALSLDEIKDYIEKKAPKKKAAKKKAPAKKKAPAKKKTTAKK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatctcgtcattgtggagtcacctgcaaaggctaaaacgatagaaaaattt
ctaggctcagactataaagttgagagtagttttggacacattgcagaccttccctctaag
gagttaggtgttgatgtagatggagattttactccaaaatataaagtctcagacgataag
aaaaaggtggtgagaaatcttaagtctcttgcaaataaagcagagatggtgtggctcgct
agtgatgaggatcgcgagggagaggctatagcctggcacttagaacaagagcttgggtta
acaccagaccgtacaaaacgtattgtttttcacgagattacaaagacggctatattaaga
gctattgagaaccctcgtaagattgattatgatcttgtaaatgcacaacaagcgcgtaga
gtgcttgatagattagtggggtatgagctctctccagtattatggagaaaggtaaaagga
ggtctttcggccggacgtgtacaatctgtttcagtaagacttattgtagagcgcgagcgt
gaggttttaggttttgagcctaaagcatcgtatagagtagatgcagagtttactacgcaa
gatggaaagtcttttaaagcaaaacttcctaaaaatataactaccaaaaaacaggcaaag
gcttttcttgagaaaaaccttagtgctacttttaaagtagatgcgcttactaagaagcca
gcaaaaaaatcaccagcaccaccatttacaacctctaccttacaacaggaagcaagtaga
aaactgtacttctctgtaagtaaaacgatgacgatggcacagcgactctatgaagctggg
catattacatatatgagaacagatagtgtaaacctatctaaagatgcaaaggctggagca
gaggcagagattgtagctgcttatggtaaggagtttcataaagaacgtaattataaaggc
aagtctaagggagcacaagaggctcacgaggcgatacgtcctacagatttctcaaagcat
tctgtaaatatggatcgcgaccagatacgtctttatgaacttatctggaaacgtgccatt
gcttcacaaatgagcgaagcacaactagagcgcacaaatgtgcaaatagcttctagtgca
ggtacagataattttacagcaaatggggagatcttaaagtttgaaggtttcttaaaagta
tacctagaaggtagtgatgatgaagatgtagaagaaacaggtttacttcctgatcttaaa
acaggagaggcgctacttaataaatacattaccgctacagagcgttttacaagaccacca
taccgttatacagaagcttctctagtaaagaaacttgaagagctaggtataggacgtcca
tctacatatgcacctactattacgactatccaaaatcgtaagtatgtagaaaaaggtact
gtagaagggaaggagcgatcttatgatgtgcttagtcttgaaaacaacgagataaaagat
agaactcttacagaaactgtagggtcagataaaggaaaactagttcctacagatgtaggg
atggtcgtaaacgacttcttggttcagcattttgaaaacattcttgattataactttact
gcaaaggtcgaagcagattttgacgacatagcagaaggaaagcaggagtggacaaagatg
atgaaggatttttacaaagattttcatcctcacgtaaaagatgtagaaaaaaatgcagag
cgtgaagtaggagagcgcatattaggagaagatccagctaccggtaaaccggtaagtgta
cgtctaggtaaatttggtcctatggtgcaaataggttctgtagaagatgaagagaagcct
cgatttgcaagtctaggtccagaccaaacgctaagcaacatcacctatgagcaggcaatg
gatctctttaaattacctaaagatttaggtatgtttgaagaagaagaggtgtctgtaaat
aatggtcgttttggaccgtatgttaagtttggaaaaacatttgtatcactacctaaagga
cgtgatccaatggatgtagatctagatgaagctatagtgtacatcaaagaaaaacaaaag
gcagacgctcctatatatatgtatgaggatcttccggttcaaaaaggtacaggtcgtttt
ggtccatacataaaatggaacggaatgtttataaacgtaaacaagaagtacgattttgat
aacctctctgatgaggatattgtagagcttatagaagtcaaaaagcaaaaggagatagat
aaagtacttcaagattttccagaagaaggaatacgtgtagaaaaagcacgctggggacgt
tctaatatcataaaaggtaagctcaaaatagagcttagtaaagatatagatgctgctgct
ttaagtcttgatgagataaaagactacatcgagaaaaaagctccaaaaaagaaggctgcc
aaaaagaaggcgccagcaaaaaagaaagctccggctaagaaaaaaaccacagcaaaaaag
aaataa
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