Dokdonia donghaensis: I597_0322
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Entry
I597_0322 CDS
T04309
Symbol
dnaE_2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ddo
Dokdonia donghaensis
Pathway
ddo03030
DNA replication
ddo03430
Mismatch repair
ddo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I597_0322 (dnaE_2)
03430 Mismatch repair
I597_0322 (dnaE_2)
03440 Homologous recombination
I597_0322 (dnaE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddo03032
]
I597_0322 (dnaE_2)
03400 DNA repair and recombination proteins [BR:
ddo03400
]
I597_0322 (dnaE_2)
Enzymes [BR:
ddo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I597_0322 (dnaE_2)
DNA replication proteins [BR:
ddo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I597_0322 (dnaE_2)
DNA repair and recombination proteins [BR:
ddo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I597_0322 (dnaE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
GLUCM-like_C
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
ANH59254
UniProt:
A0A0A2GWG4
LinkDB
All DBs
Position
386350..390741
Genome browser
AA seq
1463 aa
AA seq
DB search
MYLIFDTETTGLPKNWNAPITDSDNWPRCIQIAWQLHDEMGQVIEHQDYLVKPDGFDIPY
DAERIHGISTALAEKDGVALSEVLEKFNIALSQAKYVVGQNVGFDTNIMGAEFHRLNIGN
DLQELPVLDTCTEKTATLCQLPGGRGGKFKLPTLTELHKHLFGEGFGEAHNATADVEATT
RCFLELIRQRVYTKEELDVQPDYFDRFSQANPQPIEFIGLKHINLKKASEQIAKKLAAQN
EAPEISQTELEDNAAKLSEVKFAHLHNHSQFSILQSTASVQDIVKAAAAQKMPAVAMTDM
GNMMGAFHFTKAVKSHNAGVKKANAAAVEAGEEPEGVPLKAIIGCEFNVCVDHKNKSQKD
NGYQIVILAKNKNGYQNLCKMASIAYTDGFYYVPRIDRNVIMQYRDDLIVLTGNLYGEVP
SKILNVGEKQAEEALVWWKEQFGDDLYVELMRHGQEDEDRVMPVLIALSRKHNIKTVASN
NTFYIDKSDADAHDVLLCVKDGEKVATPKGRGRGYRYGLPNDEYYFKSGEEMKTLFADVP
EAILNVQEVVDKIEPYELARDVLLPAFDIPQEFVSPEDAIDGGKRGENAFLRHLVYEGAK
KRYGEELSEEVTERLDFELDVIEKTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVA
AYCLWITNIDPMKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMQYVIDKYGANQVAQI
ITYGTMAAKSSIRDTSRALDLSLGDADRIAKLIPTMSKLRKIFGKTDAELRSAFRSDDLP
KVQELINIETQDNLEGQMLRQARQLEGSVRNTGIHACGVIITPDDITNFVPVALAKDSDL
YVTQFDNSVVEEAGLLKMDFLGLKTLTLIKDTVKLVKYRHNVDLDPENFPLDDEKTYELF
QRGDTVGIFQYESPGMQKHMQSLKPTVFEDLIAMNALYRPGPMEYIPSFVRRKHGEEEIE
YDLPAMEEYLKETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLDKMKPKF
IEQASAKGHDPEKLEKIWKDWEAFAAYAFNKSHSTCYAWIAYQTAYLKAHYPAEYLAAVL
SNNMNDIKQVTFFMEEAKRMGLEVLGPDVNESFRKFTVNDNGAVRFGMGAVKGVGTGAVA
TIVENRKDGKYKSVFDFARRVDLRAANKKAFESLALAGGFDELDGDTHRAQFFNDNGDGI
TFLEKAVKYGARYQENENSSQVSLFGESSEVQIPEPEVPPCEEWGTMEKLKREKEVVGVY
ISGHPLDDFKTEMETFCNATVSHFNQMEAFVNRELTFGGVITDVQHRVSKNGKGWAAFTV
EDFTDSFEFRMFGEEYLKMRHFLIPNSFIHAKVFIKDGFTNRETGRKGDPRTQFNSIQQL
QDVMENNAKKLTINIDINEVAEARVAEIKEILDQHMGSAKLHFQVFEPKEKIYVKMPSKK
IKVKICQELLDSLDHNKIHYKLN
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcatttttgacaccgaaactacaggacttccaaaaaactggaacgctcctatt
acagactcagacaactggccacgctgtatacagatagcctggcagctgcacgatgagatg
ggacaagtcatagagcaccaagattatctagtaaagccagatggttttgacattccctat
gatgcagagcgtatacacgggatatcaacagcgctggcagaaaaagatggagtagcactc
tcagaggttcttgagaagtttaatatcgcactatctcaagcaaaatatgtggtgggtcaa
aacgtaggttttgatacaaatattatgggcgccgagtttcacagactcaacattggtaac
gacctgcaagagctacccgtactagatacgtgtacagaaaaaacagcaacactttgccag
ttaccaggagggcgaggtggaaaatttaaactacctacacttacagaattacacaaacat
ctttttggtgagggttttggagaagcccacaatgctacggcagatgttgaggcgactacg
cgttgctttttagaacttatacgccagcgtgtttatacaaaagaggagctagatgtacag
ccagactattttgacaggttctctcaagcaaacccgcagcctattgagtttatagggctc
aagcacatcaatctcaaaaaagcctctgagcaaattgcaaaaaaactagctgcgcaaaat
gaagccccagaaatatcacaaacagaactagaagataatgcggccaagctctctgaggtt
aagtttgcccatctacataaccactcacagttttctatactgcagtctaccgctagcgta
caagatattgtaaaggctgctgcggctcaaaaaatgcctgcagtcgctatgacagatatg
ggtaatatgatgggggcttttcactttacaaaagcggtaaagtcacataacgcaggcgta
aaaaaagcaaatgccgcagccgtagaggcgggagaagaaccagaaggagtacctcttaaa
gccattataggttgtgagtttaacgtatgtgtagaccacaaaaacaaaagccagaaggac
aatgggtaccaaatagtaatccttgccaaaaataaaaatggatatcaaaacctctgtaaa
atggcgtctattgcctacacagatggtttttattatgtacctcgtatagatcgtaatgtg
ataatgcaatatcgcgatgatcttattgtactcacaggtaacctatatggagaggtgcct
agcaaaatacttaacgtaggcgaaaaacaagccgaggaagcgctcgtttggtggaaagaa
cagtttggtgatgatctttatgttgagttaatgcgtcacgggcaagaagatgaggatagg
gtgatgcctgttcttattgcgctttcgcgaaagcataatattaaaaccgtcgcatcaaat
aacacgttttacatcgataaatctgatgcagatgcgcacgatgtattgctttgtgtaaaa
gatggagaaaaagtggcaacgccaaagggacgtggtcgtggctatcgttatggccttcct
aatgatgagtactactttaaaagtggagaggaaatgaaaaccctctttgcagatgtgcca
gaagctattttaaatgtacaagaggttgttgataaaatcgaaccttatgaactagcgaga
gacgtactgcttccagcttttgacatacctcaagaatttgtatctccagaagatgcaata
gatggtggaaaacgtggtgaaaatgcttttttaagacatctggtttatgaaggtgcaaaa
aaacgctatggcgaagaactctcagaagaagttacagaacgtttagattttgagcttgac
gttatagaaaaaacaggatacccgggttacttcttgattgtagaagattttatacgcgag
gctcgtaatatggatgtatctgtaggacctggtcgtggatctgccgcgggatctgttgca
gcatactgtttatggattacaaacatagacccaatgaagtatgacctactttttgagcgt
ttcttaaatccggatcgtgtgagtatgcccgatattgatattgattttgatgatgaaggt
cgcgggcgtgtaatgcaatatgtaatagataagtatggtgcaaatcaagttgcacaaatt
attacatacggtacaatggctgcaaagtcttctatacgtgatacctctagagcactagat
ctatcactaggagatgcagatcgtattgcaaagcttatacctactatgagtaagctgcga
aagatatttggaaaaacagatgcagagctacgtagcgcgtttagatctgatgatcttcca
aaagtgcaggagcttattaatatagaaacacaagacaatctggaaggccaaatgctaagg
caagcacgccaactagagggatctgtacgtaacacggggatacacgcctgtggagtgatt
attacaccagatgatattacaaattttgtacctgttgcactagcaaaagactcagatctc
tatgtaacacagtttgacaactctgtagtagaagaggctggattgcttaaaatggacttc
ttgggtctgaagacccttacacttataaaggacactgttaagcttgtaaagtatcgccac
aatgtagatctggatcctgagaatttccctctggatgatgaaaaaacatacgaactcttc
cagcgtggagataccgtagggatttttcaatatgaatcacctggtatgcaaaagcatatg
caatctcttaaacctaccgtttttgaagatcttattgcgatgaatgccctttatcgtcca
ggtcctatggaatacattccctcctttgtaagaaggaagcacggagaagaagaaattgag
tatgatctcccagcgatggaagagtacttaaaagagacttatggtattactgtatatcaa
gagcaagtgatgcttctatctcaaaaacttgccgactttacaaagggtgaggcagatgta
ctgcgtaaggcaatgggtaaaaagcaaattgcagttcttgataaaatgaagcctaagttt
atagaacaggcatctgcaaaaggacacgatccagaaaagctggaaaaaatatggaaagac
tgggaggcttttgccgcgtatgcctttaacaagtctcactctacctgttatgcttggatt
gcttatcaaacagcatatctaaaagcacactacccagcagagtatcttgccgctgtactt
tctaataatatgaatgatataaagcaagtaacattctttatggaagaggcaaaacgtatg
ggactagaagtactaggcccagatgtaaatgaatcttttagaaaatttactgtaaatgat
aatggcgctgtgcgttttggtatgggtgcggtaaaaggcgtaggtacaggagcggttgcc
actattgtagaaaatagaaaagatggtaagtacaaatctgtttttgactttgcacgtcgc
gtagatttacgtgcagcaaataagaaagcctttgaaagccttgcccttgctggtggtttt
gacgaactagacggcgacacccaccgagcgcagttctttaatgataatggtgatgggatt
acctttttagaaaaagctgtaaagtacggtgctcgctatcaagagaatgaaaatagctcg
caggtaagcctttttggcgagtcaagtgaggtgcaaattccagaaccagaagttccgccg
tgtgaagaatggggcacaatggagaagctcaaacgtgagaaagaagtggtaggtgtatat
atatctggtcacccactagatgattttaaaaccgagatggaaaccttttgtaacgcaaca
gttagccactttaaccagatggaagcttttgtaaatagggagctcacctttggcggggtg
attacagatgtacaacatcgcgtatcaaaaaatggtaaaggctgggctgcctttacagta
gaggattttacagatagttttgagtttagaatgtttggagaagagtacctcaagatgagg
cacttcttaatacctaatagttttatacacgcaaaggtctttataaaagacggctttact
aatagggaaactggacgaaaaggagatcctcgcacacagtttaacagtatacagcaactt
caagatgttatggagaataatgcaaaaaagctcaccataaacattgatattaatgaagta
gctgaagctcgtgtagccgaaattaaagaaatattagaccaacatatgggtagtgcaaaa
ctgcactttcaagtctttgaacctaaggaaaaaatctacgtaaaaatgcctagcaaaaag
atcaaggtcaaaatttgccaagaactactagattctctagatcacaataaaatacactat
aagttaaactaa
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