Dokdonia donghaensis: I597_0381
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Entry
I597_0381 CDS
T04309
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ddo
Dokdonia donghaensis
Pathway
ddo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I597_0381 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddo03019
]
I597_0381 (recQ_1)
03400 DNA repair and recombination proteins [BR:
ddo03400
]
I597_0381 (recQ_1)
Enzymes [BR:
ddo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I597_0381 (recQ_1)
Messenger RNA biogenesis [BR:
ddo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I597_0381 (recQ_1)
DNA repair and recombination proteins [BR:
ddo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I597_0381 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ANH59313
UniProt:
A0A0A2H245
LinkDB
All DBs
Position
463109..465214
Genome browser
AA seq
701 aa
AA seq
DB search
MTNSALPTQQDLHKLLKTHFGYDGFRPNQQEIIESICNGQDALVIMPTGGGKSMCFQLPA
LALDGVALVISPLIALMKDQVDALRANGIKAAYYNSTQPPEETQKVLADLQHNALDLIYV
APESLQLLDPVLSTIKISLIAIDEAHCISSWGHDFRPAYTQLGYLKRRYPETPLVALTAT
ADRSTQDDIAQQLSIPQAKKYISSFDRPNLYLDVRPGQKRNEQILDFLEDHPFESGIIYC
LSRKSTENLAAKLKSNGHNAAAYHAGMSAEQRSKVQEDFINDTTPIICATIAFGMGIDKS
NVRWVIHYNMPKNLEGYYQEIGRAGRDGLPSHTVLFYSYADTMQLRQFIDGAKNADYQMA
KLDRMQQYAEALSCRRKVLINYFGEFLSQDCGNCDICKNAPAYFDGTVLTQKVLSGVARM
QQKEAMGTVIDVLRGSQNAQVYDKGYQNIKTYGAAKDVSWRDLQQYVIQMINQGLLEIRF
RESGRLLLTPLSKEVLYDGKKIQLAKPSKAKAEPITKERKPKKPKGSLFEKLRELRAELA
REANVAAYIVFSDASLKDMEDQEPVTQKQFLDIQGVGQAKMEKYGADFLKLIKEHLKKSK
PKSGSKTYLETKNLIQQGLSLEEIAETRKLTIGSVYNHLIKLHEEGMEIDFYQFIQPVEV
KQVHDAILKVADPDKLKSFYEYFKEEMPYWKIRLALFLKGR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattctgcactacccacacaacaagatttacataaattactcaaaactcacttt
ggttatgatggttttagacctaaccagcaagagattattgagtccatttgtaatgggcaa
gatgcactagtcataatgcctacgggtggtggtaaatctatgtgttttcaactgccagct
ctggcgcttgatggggttgccctcgtgatctcaccgctcattgctttaatgaaagatcag
gtagatgctttgcgagcaaatggcattaaggcagcctattataacagtacacaaccacca
gaggagacgcaaaaggtactagcagacctacagcacaatgcgctagatcttatttatgtg
gctccagaaagcttacaactattagaccccgtactttctacaataaagatatcactcatt
gccatagatgaggcgcactgtatctcatcttggggacacgattttagacccgcttacaca
caactgggctatttaaaaagacgttacccagagactccacttgtagcactcacggcaact
gcagataggtctacgcaagatgacattgcacaacaacttagtatcccacaagcaaaaaaa
tacatctcctcttttgacagacctaacctctatctagacgtgcgtccaggtcaaaaaaga
aacgagcaaattcttgactttttagaagatcacccttttgagagtggaatcatttactgt
ctatcaagaaaaagcacagaaaatctcgcggccaaacttaagagtaacgggcacaacgcc
gccgcctaccacgcaggtatgagtgcagagcaacgctcaaaagtgcaagaagattttata
aacgataccacacctataatttgtgcaacaattgcctttgggatgggtattgacaagagt
aacgtgcgctgggtgatacactataatatgcctaaaaatcttgaaggatattatcaagaa
ataggaagagcaggccgtgatggtttaccctcacacaccgtgcttttttacagctatgca
gacacgatgcagctacgccagtttatagatggagcaaaaaatgccgactaccagatggct
aagcttgaccgtatgcagcaatatgcagaggccctaagctgtaggcgtaaggttcttata
aactactttggcgagtttttatcgcaagactgtggaaactgtgacatttgtaaaaatgca
cccgcatattttgacggcactgtacttactcaaaaagtactttccggggtggcgcgtatg
caacaaaaggaagcaatgggtaccgtgatagacgttttacgaggttctcaaaacgcccaa
gtgtatgacaaagggtatcagaatataaaaacttacggcgctgcaaaggatgtctcttgg
cgagatcttcagcagtatgtgatacaaatgattaatcaaggattgttagaaatacgcttt
cgcgaaagcggaagacttctcctcacaccgctttctaaagaagttttatacgacggtaaa
aagatacaactcgcaaaacctagcaaggcaaaagccgaaccgattactaaagaacgtaag
cctaaaaaaccaaaaggctctctttttgaaaaactacgagagctaagagccgaactagct
agagaggcaaatgttgcggcttatattgtattctcagatgcgtctcttaaagatatggaa
gaccaagaacctgtgactcaaaaacagtttttagacatacaaggtgtaggccaggctaaa
atggaaaaatatggcgccgactttttaaaactcatcaaagaacacctcaaaaaatcaaaa
cctaaaagcggtagcaaaacgtatcttgagactaaaaacctcatccagcaaggcctctca
cttgaagaaattgcagagactcgcaagctcaccataggctctgtgtataatcacctcata
aagctgcacgaagagggaatggagatagatttttaccagttcatacagcccgtagaggtc
aagcaagtacacgacgccatcttaaaagtggcagatccagacaagctcaaatctttttat
gaatacttcaaagaggagatgccgtactggaaaataaggctagcgctatttttaaagggt
aggtag
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