Dokdonia donghaensis: I597_1397
Help
Entry
I597_1397 CDS
T04309
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ddo
Dokdonia donghaensis
Brite
KEGG Orthology (KO) [BR:
ddo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddo03009
]
I597_1397 (rimO)
Enzymes [BR:
ddo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
I597_1397 (rimO)
Ribosome biogenesis [BR:
ddo03009
]
Prokaryotic type
ribosomal protein modification factors
I597_1397 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ANH60312
UniProt:
A0A0A2GWE0
LinkDB
All DBs
Position
1567987..1569339
Genome browser
AA seq
450 aa
AA seq
DB search
MRTKSLKKNKINVVTLGCSKNVYDSEVLMGQLKANEMDVAHEEDGNIVVINTCGFIDNAK
EESVNTILEYVKQKEEGDVDKVFVTGCLSERYKPDLQKEIPDVDQYFGTTELPGLLKALG
ADYKHELIGERITTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSKSIEHLVVEAKKLA
ANGVTELILIAQDLTYYGLDLYKKRNLAELLENLVQVEGIEWIRLHYAFPSGFPVDVLDV
MKREPKVCNYLDIPLQHIADPILKSMRRGTTMAKTNALLERFRESVPEMTIRTTLIVGYP
GETEEDFQTLKQWVKDQRFERLGCFTYSHEENTHAYNLEDDVPEDVKMDRANQIMEIQSQ
ISWELNQQKIGKEFKIVVDRKEGNFFIGRTEFDSPDVDNEVLVDATKFYLKTGDYAMVKV
TEAEDFDLYAEPLVALERPQALHAKRATKK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatcattgaagaagaataagataaacgtagtaactctaggttgctcaaaa
aacgtttatgatagtgaggtcttaatgggccagcttaaagcaaatgagatggatgttgct
cacgaagaagatggtaacattgttgtgattaacacctgtggatttatagacaatgcaaaa
gaggagtctgtaaacaccattcttgagtacgtaaagcaaaaggaagaaggcgatgtagac
aaggtatttgttacaggatgtctttctgagcgatacaagccagaccttcaaaaggagatt
ccagatgtagatcagtattttggaacaacagagctaccaggattacttaaagcacttgga
gcagactataagcacgagcttataggtgagcgtatcacaactacaccaaaaaactacgcc
tacctaaaaatagccgaaggctgtgaccgcccttgttctttctgtgcaattcctttaatg
agaggtaagcacaagtcaaaatctattgagcacctcgtagtagaagcaaaaaaacttgct
gcaaacggcgtgacagagttaatcctcatagcacaagatcttacgtattacggtcttgac
ttatataaaaaacgtaacctagcagagcttcttgaaaaccttgttcaagtagaaggtata
gaatggattcgtctacactatgcatttccttctggtttcccggtagatgtacttgatgtg
atgaagcgtgagcctaaggtgtgtaactaccttgatattccgttgcaacacattgcagat
cctattttaaaatctatgcgacgtggtacaacaatggcaaaaacaaatgcgttgttagaa
cgctttcgcgaaagcgtaccagagatgaccataagaactacccttattgtaggatatcct
ggagaaaccgaagaagatttccaaacgctgaagcaatgggtaaaagatcaacgttttgaa
cgtttaggatgttttacatactcacacgaggaaaatacacacgcatataatctagaggac
gatgtgccagaggatgtaaaaatggatcgcgcaaaccagattatggagatccaatcacaa
atttcttgggagctcaatcagcagaaaatagggaaggagtttaaaattgttgtagatcgt
aaagaaggaaacttctttataggtcgtacagaatttgactcaccagatgtagataacgag
gtcctagttgatgcgactaagttttatttaaaaactggagactacgcaatggtaaaagta
acagaggcagaagattttgatctgtatgcagaaccacttgtagccttagagcgaccacaa
gcattgcacgcaaaacgtgctaccaaaaaataa
DBGET
integrated database retrieval system
