Dokdonia donghaensis: I597_1615
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Entry
I597_1615 CDS
T04309
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ddo
Dokdonia donghaensis
Brite
KEGG Orthology (KO) [BR:
ddo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddo03009
]
I597_1615 (rlmCD)
Enzymes [BR:
ddo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
I597_1615 (rlmCD)
Ribosome biogenesis [BR:
ddo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I597_1615 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_25
MTS
Cons_hypoth95
Methyltransf_15
TRAM
PrmA
UPF0020
Methyltransf_11
N6_N4_Mtase
DUF5318
FtsJ
Methyltrans_SAM
PCMT
Motif
Other DBs
NCBI-ProteinID:
ANH60521
UniProt:
A0A0A2GWY4
LinkDB
All DBs
Position
complement(1811425..1812840)
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AA seq
471 aa
AA seq
DB search
MGRRKTNRKIFENIAVTDAGAKGKAIGHAPDGKVLFINNAVPGDVVHVQTTKKRKAYYEG
TATEVVTLSRKRTEPQCQHFEFCGGCKWQHMDYKYQLEYKQQEVVNNLTRLGKIELPEVT
PIAGSKEQYFYRNKMEFGFSDSKWLTLEQIKSGEVIEDRNALGFHIAGMWDKILDIEKCH
LQRDPSNTIRNGIKEFATANDMAFYNARNQEGLLRTLMIRTSTTGELMVLVQFYKEDVQK
RELLLNYIKDTFTEVTSLLYVINGKGNDTIYDQEVICYAGRDHIFEEMEGLRFKINAKSF
YQTNSEQAYELYKITRDFAGLTGNELVYDLYTGTGTIAQFVAKKAKKVIGVEAVPDAITA
AKENAKLNGIENAEFFVGDMKKVFNSEFIATHGEPDIIITDPPRDGMHKDVVDQILNISP
QKIVYVSCNSATQARDLALLDDVYKVTKVQPVDMFPQTHHVENVVLLEKRS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggtagacgtaaaactaatcgtaagatttttgaaaatatagccgtaacagatgccggc
gcaaaaggtaaagccataggtcacgcaccagatggtaaggtgttatttataaacaacgct
gtaccaggagatgtggtacacgtacagactacaaaaaaacgtaaagcctactatgagggt
actgcaacagaggtggttacgctttcgcgaaagcgtacagaaccacaatgccagcacttt
gagttttgtggtggttgcaagtggcagcatatggattataagtaccagcttgagtacaaa
cagcaagaggtagtaaataatctaacccgcctaggaaaaattgaattaccagaagttact
cctattgccggaagcaaagagcagtacttctatagaaataaaatggagtttggattttct
gactcaaaatggctcacactagagcaaataaaaagtggcgaggtgatagaagatcgcaac
gcccttggttttcatattgcaggtatgtgggataagatacttgatattgaaaaatgtcac
ctacagcgcgaccctagtaatactatacgtaatggtataaaagaatttgctaccgcaaat
gatatggctttttacaatgccagaaatcaagaagggcttttacgcacgcttatgatacgc
acctctactactggagagcttatggtactcgtacagttttataaggaagatgtacagaaa
agagaactacttctcaactacataaaagacacctttacagaggttacatctttactatat
gtaattaatggtaagggcaatgacaccatttatgatcaggaggtaatttgttatgcaggg
cgtgatcacatctttgaagagatggaaggccttaggtttaaaatcaatgctaagtccttt
taccagactaactcagagcaagcatacgagttatataaaatcacaagagactttgctggt
cttacaggtaatgagcttgtatatgacttatatacaggtacaggaactatcgcacagttt
gttgcaaaaaaagctaaaaaagtgataggtgtagaggctgtaccagatgctatcactgct
gcaaaggaaaatgcaaaactcaatggtatagaaaatgctgagttctttgtaggagatatg
aagaaggtttttaactcagagtttattgccacacacggtgagccagatattataataaca
gatccacctagggatggtatgcacaaagacgttgtagaccagatattaaatatctcacct
caaaaaattgtatatgtaagctgtaatagtgcaacacaagcaagagatcttgcgttacta
gatgacgtgtataaggtaactaaggtacaacctgtagatatgtttcctcaaactcatcac
gtagagaatgttgtacttttagagaaaagatcataa
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