Dokdonia donghaensis: I597_2236
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Entry
I597_2236 CDS
T04309
Symbol
cfiB
Name
(GenBank) 2-oxoglutarate carboxylase small subunit
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
ddo
Dokdonia donghaensis
Pathway
ddo00020
Citrate cycle (TCA cycle)
ddo00620
Pyruvate metabolism
ddo01100
Metabolic pathways
ddo01120
Microbial metabolism in diverse environments
ddo01200
Carbon metabolism
ddo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ddo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
I597_2236 (cfiB)
00620 Pyruvate metabolism
I597_2236 (cfiB)
Enzymes [BR:
ddo01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
I597_2236 (cfiB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
Biotin_lipoyl_2
ATP-grasp_4
RimK
HlyD_D23
ATPgrasp_ST
ATPgrasp_Ter
ATP-grasp_5
YqfD
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
ANH61134
UniProt:
A0A0A2GTL0
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All DBs
Position
2526740..2530192
Genome browser
AA seq
1150 aa
AA seq
DB search
MKIKKVLVANRGEIAIRVLRACTELNIATVAVYTYEDRYSQHRNKADESYQIGADNEPLK
PYLDMDQIIDLAKSKNVDAIHPGYGFLSENSEFARRCAKNGIIFIGPEPEVMDALGDKIT
AKKVAQSCGVPIIESNKKALNSLETALSEAGKIGYPVMLKAASGGGGRGMRIIRKEEDLQ
LSFDSARNEALNSFGDDTMFLEKYVENPKHIEVQIVADTHGNIRHLYERDCSVQRRHQKV
VEMAPSYNLSQTLRDNLYKYAVAIATEINYNNIGTVEFLVDADDNIYFIEVNPRIQVEHT
VTEMVTGIDLVKTQIFVSGGYKLSDKQIKIYGQESIGTYGFAIQCRLTTEDPTNKFTPDY
GKITTYRSASGMGIRLDAGSIYQGYKVSPFFDSMLVKVSAHGRTLDGAIRKMVRALKEFR
IRGVETNIHFLQNVIQTDVFKNGETTVNFIQNTPSLFNIKLSQDRTSKVVQFLADVSVNG
NSDVKTKDPKKVFTNPKVPLYSLSDPFPKGTKDMLTELGPEAFCKWLLEEKKIHFTDTTM
RDAHQSLLATRMRSYDMLKVASSFAKNHPNTFSMEVWGGATFDVCMRFLHESPWTRLREL
RKAVPNILFQMLLRGSNGVGYKAYPDNLIEKFVEKSWENGVDLFRIFDSLNWVKAMEPSI
QYVRNLTGGIAEGAISYTGDILDTKQTKYNLKYYTQLAKDLENAGAHMIAIKDMAGLLKP
YAATELVTALKDTVNVPIHLHTHDTSSLQTATYLKAIEANVDVVDVALGGLSGLTSQPNF
NAVVEMLKYQDREHSFDMEKLNQFSNYWEDTRELYYPFESGLKAGTAEVFQHEIPGGQYS
NLRPQATALGLADRFTEVKKMYAAVNKMFGNLVKVTPSSKVVGDMAIFMVTNNLTPEDVM
ERGDTISFPESVINFFKGDLGQPVGGFPKKLQAIILKNKEAYTDRPNAHLAPVDFDKEYK
TFTETFQKGFTRPLEMEDFLSYMLYPKVFEQAHENYKKYGNLALVPTKNFFFGMKLGEET
LIELEPGKTVIIKLLSIGIPNDEGMRTVFFKVNGENRFVEVHDTSLNIKKVENVKIDPDN
ENHIGAPLQGSLYKVLVKKGQEVKENDPLFIIEAMKMETTVVAFKDGTVQSIIVTDGTMV
SQDDLVVTLE
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaaaagtcctcgtagcaaatcgcggggaaattgctattagagtactacgt
gcttgtacagaacttaatattgcaaccgtagctgtctacacttatgaagatagatactca
caacatcgcaacaaagcagatgagtcttaccagataggagcagataatgaaccgctcaaa
ccttatttagatatggatcaaatcattgatctagcaaaatctaaaaatgtagatgccatt
caccccggatacggcttcttatctgaaaactcagaatttgcaagaagatgtgcaaaaaac
ggtatcatctttataggtcctgagccagaagtaatggatgcactaggtgataaaatcacc
gcaaaaaaagtagcacaatcttgtggagtacctataatagagagtaataaaaaagcctta
aattcactagaaactgccctaagtgaagctggaaaaataggatacccagtaatgctcaaa
gctgcctctggtggcggtggtcgcggtatgcgcatcatacgtaaggaagaagatttacag
cttagttttgactctgcacgtaatgaggcgctcaactcttttggcgatgatacaatgttt
cttgagaagtatgtagaaaacccaaaacatatagaagtacaaatagtagcagacacacac
ggtaatataagacacctttatgaacgtgattgctctgtacaacgcaggcaccagaaggtg
gtagagatggctccttcatataacctatcacaaacgctacgcgataacctttataagtat
gctgtagctattgctacagagataaattataacaacataggtaccgtagagtttctcgta
gatgcagatgataatatatatttcatcgaggttaaccctcgtatacaagtagagcacaca
gtaacagaaatggttacaggtattgaccttgtaaagacacaaatctttgtgtctggcggt
tataaactatcagataagcagataaagatttatggacaagagtctataggtacttacggt
tttgccatacagtgtagacttaccacagaagatcctactaataaatttacaccagattac
ggaaagataacaacctaccgtagcgcctctggtatgggtatacgtctagatgctggtagc
atttatcaagggtataaagtgagtccgttttttgattcgatgcttgtaaaagtatctgct
cacggtagaacgctggatggtgcaatacgtaagatggtgcgcgccttaaaagaatttagg
atacgtggtgtagagaccaacattcattttcttcaaaatgtcatacagacagacgttttt
aaaaatggagagaccacggtaaatttcattcagaatactccttccctatttaatattaaa
ctttctcaagatcgtacctctaaggttgttcagtttctggcagatgtgagtgtaaatggt
aatagtgatgtaaaaacaaaagatccaaaaaaggtatttacaaaccctaaggtgccactt
tacagcctgtctgatccgtttccaaaagggacaaaagatatgcttacagagctaggtcca
gaggcattttgtaagtggttactagaggagaaaaaaatacactttacagataccacaatg
cgtgacgcacaccagtctttactggcaacgcgtatgcgctcttatgatatgctcaaagta
gcatctagctttgcaaaaaaccaccctaacacctttagtatggaagtatggggaggtgca
acctttgatgtatgtatgcgattcttacacgagagcccttggacacgtttacgagagtta
cgcaaggcagtacctaacatcttgttccagatgctccttcgtggatctaatggtgtgggt
tacaaagcatatccagataaccttattgaaaagtttgtagagaagtcttgggagaatggt
gtagacctcttccgtatttttgactctcttaactgggtaaaagcaatggaacctagtata
caatacgtgcgtaatcttacaggaggaatagccgaaggtgccataagttatacgggagat
attctagatactaagcaaactaagtacaacctcaagtactacacacaacttgcaaaagat
ctagaaaatgctggggcacatatgattgccattaaggatatggcaggattattaaaacca
tatgccgcgacagaacttgttacagcgcttaaggacacggtaaatgtacctatacacctg
cacacgcacgacacgtcttctttacaaacagctacttacctcaaggccattgaggcaaat
gtagatgtggtagatgtagctctaggaggactttctggattaacttcacaacctaacttt
aatgctgtagtagagatgcttaagtatcaagatagagaacactcgtttgatatggaaaaa
ctcaatcagttttctaattattgggaagatacgcgtgagctctactacccttttgagtct
gggcttaaagccggaacggcagaagtctttcagcacgagataccaggtgggcagtactca
aacttgcgcccacaagcaactgccttaggccttgcagatagatttacagaggtaaagaag
atgtatgccgctgtaaataaaatgtttggcaacctagtaaaggttacgcctagctctaag
gtagtaggcgatatggccatttttatggtgaccaataacctcacaccagaagatgtgatg
gagcgtggtgataccatttccttcccagagtctgttataaacttctttaaaggagatctt
ggtcagccagtaggtggtttcccaaaaaagctacaagccattattttaaaaaataaagaa
gcttatacagatagacctaatgcacacctggcgccagtagattttgataaggagtacaaa
acctttacagagaccttccaaaaagggtttaccaggccactggagatggaagattttctc
tcatatatgctgtaccctaaggtttttgagcaagcacacgaaaactataagaaatacggt
aacctagccctagtacctactaagaatttcttctttggtatgaaactaggagaagaaaca
cttattgagctagaacctggaaaaacggttatcatcaagttactctctattggtattcct
aatgatgaggggatgcgcacggtattctttaaagtaaatggagaaaaccgttttgtagag
gtacacgacacttcccttaatatcaaaaaggttgaaaacgtaaaaatcgatccagataat
gaaaaccacataggtgctccattacaaggctctctttacaaggtactggtcaaaaaagga
caagaagtcaaagaaaacgacccactttttataatagaagctatgaaaatggaaactacc
gtggttgcctttaaagatggtactgtacaatctataatcgtgacagatggaacaatggtg
tctcaagatgatctcgttgtaactcttgaataa
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