Delphinus delphis (saddleback dolphin): 132413698
Help
Entry
132413698 CDS
T11117
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp04151
PI3K-Akt signaling pathway
ddp04382
Cornified envelope formation
ddp04510
Focal adhesion
ddp04512
ECM-receptor interaction
ddp04820
Cytoskeleton in muscle cells
ddp04926
Relaxin signaling pathway
ddp04933
AGE-RAGE signaling pathway in diabetic complications
ddp04974
Protein digestion and absorption
ddp05146
Amoebiasis
ddp05165
Human papillomavirus infection
ddp05200
Pathways in cancer
ddp05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132413698 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132413698 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132413698 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132413698 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
132413698 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
132413698 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
132413698 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132413698 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
132413698 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
132413698 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
132413698 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
132413698 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddp04147
]
132413698 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ddp00536
]
132413698 (COL4A2)
Exosome [BR:
ddp04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
132413698 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ddp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132413698 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
132413698
NCBI-ProteinID:
XP_059851812
LinkDB
All DBs
Position
18:75944413..76122583
Genome browser
AA seq
1711 aa
AA seq
DB search
MDRDQRAASRPALRRWLLLGAVTVGLLAQGVLAGVKKFDVPCGGRDCSGGCQCYPEKGGW
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGDRGAPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTVGDAGYPGPSGPGGFLGPRGPQGPKGQKGEPYALSSEDRD
RYRGEAGVPGLVGFQGPPGRPGPVGQMGPVGAPGRAGPPGPPGPKGQPGNRGLGFYGEKG
EKGDMGQQGPGGIPPDNSYVERPKNDVILPEQYKGEKGSEGEPGRKGISMKGEEGIMGFS
GVRGAPGFDGEKGSPGQKGSRGPDGYQGPDGYPGPKGEMGEPGPPGPPAYSPHPSLDKGA
RGDPGFHGAPGDPGARGEPGDRGLPGLPGTSIGDEDEKRGLPGEMGPKGFTGEQGIPALY
PGLPGADGRPGLRGPPGFPGPPGPDGFLFGLKGAEGRVGYPGPSGFPGARGQKGWKGDAG
DCQCAEGDQFIGGLPGPPGPKGFPGTNGEPGRKGSPGDPGQHGIPGFPGFKGTPGGVGPP
GPKGMKGDSRTITTKGERGQPGVPGVPGLKGDSGIPGRDGLDGFPGLPGSPGDGIKGPSG
DAGHPGPPGTKGIPGERGPPGLGLPGPKGERGFPGDAGLPGPPGFPGPPGTPGAPGQIDC
DTGVKRPIGADRQETVQPGCVGGPKGLPGQPGPPGPPGAKGLRGLPGLSGTDGAQGLKGL
PGDPGPEGFPGPPGFVGPRGVKGAVGRPGLDGLPGPSGLPGPVGPPGDRGLPGEVLGAQP
GPRGDTGLPGRSGLKGPPGERGPPGFRGSQGMPGMPGPKGQQGFPGPLGQPGLPGPPGQH
GYPGAPGREGPLGPPGTPGFGGLPGDRGEPGDTGVPGPVGMKGVSGDRGDPGWQGERGHP
GSPGFKGVAGMPGAPGPKGVKGSPGMDGFQGLLGLKGRSGLPGNKGETGFVGVPGLKGLA
GEPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGLPGMPGIPGLSG
VPGLPGKPGYVKGVKGDTGFPGVPGSPGFPGVPGSPGISGFPGFTGSRGDKGAPGRVGLH
GEIGPIGDFGDIGNTIDLPGSPGLKGEGGTAGAPGLKGFFGEKGSEGDVGFPGITGLAGV
QGPPGLKGQTGFPGLTGLQGPQGEPGRAGVPGTKGDYGWPGSPGLPGLPGLRGIGGLHGL
PGTKGFPGSPGADIHGDAGLPGPAGARGDPGEANTLPGPAGPPGRKGERGVPGERGPVGS
PGLQGFPGITPPSNISGLPGDVGAPGIFGLEGYRGPPGPPGPVALPGIKGDEGSPGAPGN
PGTKGWVGDSGPQGRPGVFGLLGEKGPRGEQGFMGNTGAAGSVGDRGPKGPKGDRGLPGA
PGAVGAPGIAGIPQRVAIQRGPVGPQGRRGPPGPQGEMGPQGRPGEPGFRGNPGKAGPQG
RGGVSAVPGFRGDQGPVGLQGPVGYEGEPGRPGSPGLPGMPGRSISIGHLLVKHSQTEQD
PMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASRN
DKSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPPGWRSLWI
GYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTIPE
QSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagaccagcgcgcggcgtcgcgccctgccctgcggcggtggctactgctggga
gctgtgacagtggggctcctggcccagggcgtcctggcgggcgtgaagaagttcgacgtg
ccctgtggagggagagactgcagtgggggctgccagtgctatcccgagaaaggaggatgg
ggccagccagggccagtgggcccacagggatacaccgggccccccggcttacaagggttc
ccaggactgcaaggccggaaaggtgacaagggtgataggggggctcccggcatcacagga
ccgaagggagacgtgggagccagaggcgtttctggatttcctggtgccgacggaattccc
ggacatcctggccagggcgggcccagaggaccgcctggctacgacggctgcaacgggaca
gtgggtgacgcaggctacccgggacccagcggccctggcggcttcctcggcccccgtggg
ccccaaggacccaaagggcagaaaggcgagccctacgctctgtctagtgaggaccgcgac
agatacaggggggaagctggagtgcccgggctggtcggcttccaggggcctcccggccgc
cctgggcctgtgggacagatgggtccggttggagctccaggaagagcaggaccccctgga
ccccctggaccaaaaggacagccaggcaacagaggacttggtttttacggagaaaaagga
gaaaagggcgacatgggacagcagggacccggtgggattccaccagacaacagttacgtc
gagaggcccaaaaatgacgtgatcctcccagagcagtataagggtgaaaaaggaagtgag
ggggaaccaggaagaaaaggcatttccatgaagggagaagaaggaatcatgggcttttca
ggagtgcggggtgcccctggcttcgatggtgagaaaggttcaccgggacagaagggaagc
agaggaccggatggttaccaaggccctgatggatacccaggacccaagggagaaatgggt
gaaccaggcccccccggccccccagcctactccccgcatccttccctggacaaaggtgcc
agaggggacccaggattccacggagcccccggggacccaggagcccggggggagcctgga
gaccgcggcttgccaggcctgcctggtacatccatcggagatgaagatgagaagagaggc
ttaccaggcgagatgggacccaaaggcttcacaggagagcagggcatccccgccctgtac
cccggcctgccgggagctgacggaaggccagggctccgaggtcccccagggttcccggga
ccacctggcccagacggtttccttttcggccttaaaggagcagagggcagggtgggctac
cctggaccttctggtttccccggggctcgcggacagaaaggatggaaaggcgatgccggc
gactgtcagtgtgcagagggtgaccagttcattgggggtcttccggggccaccaggaccc
aagggctttcccggcaccaatggggaaccagggaggaaaggcagcccgggagaccccggc
cagcacggcatccccgggttcccaggattcaagggaacccctggtggtgttggccctccc
gggcccaaaggaatgaagggagattctcgaaccatcaccaccaaaggcgagcggggccag
ccaggtgtcccaggtgtgcctggactgaaaggggacagcggcatcccaggccgtgatggg
ctggatggattcccaggcctcccaggctctcccggtgatggcatcaaaggcccctcaggg
gacgcagggcacccaggaccccccggtactaagggcattccaggagaaaggggcccccca
ggattggggctgccaggccccaaaggcgagcgtggcttccccggcgatgctggattacct
ggacctccaggcttccccgggcctcccggcacccccggcgctccaggacaaatagattgc
gatacgggtgtgaaaaggcccatcggagcagacagacaggagaccgtccagccaggttgt
gttggagggcctaagggattgccgggccagccgggcccccccggccccccaggtgccaaa
ggcctcagagggcttccgggattatcgggaactgacggagcacaagggctcaagggtctc
ccgggagatccaggtccagagggattcccaggacccccaggcttcgtggggcctcgagga
gtcaaaggtgcagtaggccgccctggcctggatggactcccgggtccctccggcctgccg
gggccagtcgggcctccgggagacaggggcctccctggagaagtcttgggggcccagccc
gggcctcggggagacaccggactgcctggacgctctgggctgaagggcccccccggagag
agaggccctcctggattccggggaagccaggggatgccgggaatgccgggcccgaagggt
cagcagggcttcccaggacctttgggccagccgggactgcccgggccaccaggacagcat
ggctaccctggagctcccggccgggaagggcccttggggccgccgggcaccccaggtttt
ggaggtctgcctggagacagaggggagccaggtgacacaggcgtccctggccccgtgggc
atgaagggcgtctccggggatagaggtgaccctggctggcagggtgagagaggtcatccc
ggaagccctggattcaaaggagtggccgggatgcctggtgccccgggccccaaaggagtt
aagggttctcccgggatggacggcttccaaggcttgctcgggctcaaggggagatccggg
cttccgggaaacaaaggagagactggatttgttggagttcccgggctgaagggcctggct
ggcgagcccggtgtgaaaggcagccgaggggaccccggcccccccggaccacctcccatc
atcctgccaggaatgaaagacatcaaaggagagaaaggagatgaaggccccatgggactg
aaaggatacctgggcttgaaaggccttcccggaatgccagggatccccgggctgtcagga
gtccctgggctgccggggaaaccaggctacgtcaaaggagtcaaaggagataccggattc
cccggcgtgcccgggtcaccaggattccccggcgtgcccggctcccccggaatctcaggg
tttccgggcttcacaggcagtaggggcgacaagggagctccggggagagtaggccttcac
ggcgagatcggccccatcggtgactttggtgatattggaaacactatagaccttccagga
agtccgggcctgaagggggagggaggcaccgctggagcaccaggtctaaagggattcttc
ggagagaaaggatcagagggtgatgtcggcttccctgggatcaccggcctggcaggagtc
cagggccctcctggacttaaagggcaaacaggctttccaggactgacagggctgcagggg
cctcagggagagccgggacgggcgggagtgcccggcaccaaaggagactacggctggccg
gggagcccaggcctaccaggtctgcccggcctccgcggcatcggcggattacacggcttg
ccaggcaccaaaggcttcccaggatccccaggtgcggacatccatggggacgccggctta
ccaggtcctgccggggccaggggtgacccaggagaggccaacacccttccaggccccgca
ggacccccgggacggaaaggggagcgtggagtcccaggggaacgaggcccggttgggagc
ccaggacttcaggggtttccaggcatcacccccccttccaacatctctgggttaccaggt
gacgtaggcgcgcctgggatatttggcctggaaggttatcgaggtcccccggggccacct
gggcccgtggctcttcctggaatcaaaggagatgaggggagtccaggagcccccggaaac
ccggggaccaaaggatgggtcggggactccgggccccagggccggcctggcgtgttcggg
ctcctgggagaaaaagggcccagaggggagcaaggattcatgggcaacacaggcgccgcc
gggagtgtgggagaccgaggccccaaaggacccaaaggagatcgaggactcccgggtgcc
ccgggtgctgtgggcgccccggggattgcaggaatcccccagagggttgccatccagcgg
gggccagtgggtccgcagggaagaagaggccctccggggcctcagggggagatgggaccc
cagggccgcccgggagaaccaggtttccgcgggaatccagggaaggcagggccccaggga
agaggcggcgtgtcagctgttcccgggttccgaggagaccaggggcccgtggggctgcag
gggcccgttggctacgaaggggagccaggccgccccgggagccccggcctgcccggcatg
cccggccgcagcatcagcatcggacacctcctggtgaagcacagccagacggagcaggac
cccatgtgccccgtgggcatgaacaagctctggagcggatacagcctgctgtacttcgag
ggccaggagaaggcccacaaccaggatctggggctggcgggctcctgcctggcccggttc
agcacgatgcccttcctgtactgcaaccctggcgacatctgctactacgccagccgcaac
gacaagtcctactggctctccaccaccgccccgctgcccatgatgcctgtggccgaggag
gacatcaggccctacatcagccgctgctccgtgtgcgaggccccggccgttgccattgcc
gtccacagccaggacgtctccatcccccactgcccgcctggatggcggagcctgtggatc
ggatattccttcctcatgcacacggccgcgggcgacgaagggggcggccagtcgctggtg
tcaccgggcagctgcctggaggacttccgagccacgccgttcatcgagtgcaacggcgcc
cgaggcacctgccactactatgccaacaagtacagcttctggctcaccaccatccccgag
cagagcttccagggctcaccctcggccgacacactcaaggccggcctcattcgcacgcac
atcagccgctgccaggtgtgcatgaagaacctgtga
DBGET
integrated database retrieval system
