Delphinus delphis (saddleback dolphin): 132415331
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Entry
132415331 CDS
T11117
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03030
DNA replication
ddp03420
Nucleotide excision repair
ddp03430
Mismatch repair
ddp03440
Homologous recombination
ddp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132415331 (RPA1)
03420 Nucleotide excision repair
132415331 (RPA1)
03430 Mismatch repair
132415331 (RPA1)
03440 Homologous recombination
132415331 (RPA1)
03460 Fanconi anemia pathway
132415331 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ddp03000
]
132415331 (RPA1)
03032 DNA replication proteins [BR:
ddp03032
]
132415331 (RPA1)
03400 DNA repair and recombination proteins [BR:
ddp03400
]
132415331 (RPA1)
Transcription factors [BR:
ddp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
132415331 (RPA1)
DNA replication proteins [BR:
ddp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
132415331 (RPA1)
DNA repair and recombination proteins [BR:
ddp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
132415331 (RPA1)
MMR (mismatch excision repair)
132415331 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
132415331 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Ubiquitin_At1g33420
Motif
Other DBs
NCBI-GeneID:
132415331
NCBI-ProteinID:
XP_059854642
LinkDB
All DBs
Position
19:46729651..46782974
Genome browser
AA seq
617 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGVTGITPILQVINIRPIATGNNPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEERLSSNCICQINRFIVNTLRDGRRVIILMELEVLKSGEEVGLKIGNPVPYNE
GQGQQPAVPPPVSAASPPASRPQQQNGSSGVGSTVSKTFGASKTFAKPGGTSLGNSSGAT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGVGDLENKPKDSLVDIIGICKSYEDVTKITVKSNNREVSKRNIYLMDMSGKVVNATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ
ALAGVSISDLKGGGIGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
EYGRRLITSIRRNAAAM
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagttacaggc
ataacacccattctccaagtcattaacatccgtcccattgctacagggaataatccaccc
cgttatcgactgcttatgagtgatggattgaatactctgtcttctttcatgttggcaaca
cagttgaaccctcttgttgaggaagaacgattgtctagcaactgtatttgccagattaac
cgatttattgtgaacactctgagagatggaaggagagtgattattttgatggagttagaa
gttttgaaatcaggtgaagaagttggattaaagattggcaatccagtgccctataatgaa
ggacaaggacagcagccagcagttcctcctccagtctcagcagccagtccaccagccagc
aggccccagcaacagaatgggagctcgggagtgggttctactgtatctaagacttttggt
gcctcaaagacatttgcaaaacctggaggtaccagcctagggaacagctccggggcaaca
caggccaaagtggtacccattgccagcctcaccccttaccagtccaagtggactatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaaa
ctcttctctatagaactagttgatgagagtggcgaaatcagagcgactgctttcaacgag
caagcggacaagttctttcctcttattgatgtgaacaaggtctattacttctctaaaggc
accctgaagattgccaacaaacagttcacagccgtcaaaaacgactatgagatgaccttc
aataatgagacttctgtcatgccctgtgaagatggtcatcatttacccacagtccagttt
gatttcacaggggttggtgacctagagaacaagcctaaagactcacttgtagacataatc
ggaatctgcaagagctatgaagatgtcactaaaatcacagtgaagtctaacaacagagaa
gtctctaagaggaatatctatttgatggacatgtcagggaaagtggtgaatgctactctg
tggggagaagatgctgatagatttgatggttctagacaacccgtgatggcgatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcgagtaccgtcatt
gtgaaccctgacatcccagaggcctacaagcttcgtggatggtttgactcggaaggacaa
gccttagctggcgtttccatctctgatctaaagggtggaggaataggagggagcaacacc
aactggaaaactttatatgaggttaaatcagagaacttgggccaaggtgacaagcccgac
tattttagctctgtggcgacagtggtgtatcttcgcaaagagaactgtatgtaccaggcc
tgcccaactcaggactgcaataagaaagtgattgatcaacagaatggattgtaccgctgc
gagaagtgtgacagtgaatttcccaatttcaagtaccgcatgatcctgtcagtaaatatt
gctgactttcaagagaatcagtgggtcacatgtttccaggagtctgcagaggccatcctt
ggacaaagcactgcttatcttggggagttaaaagagaagaacgagcaagcgtttgaggaa
gttttccagaatgccaacttcagatcttttacattcaggatcagggtcaagttggagacc
tacaatgatgagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacaga
gaatatggcagaaggctgatcacgagcatcaggagaaacgctgcggcgatgtga
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