Delphinus delphis (saddleback dolphin): 132417082
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Entry
132417082 CDS
T11117
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03015
mRNA surveillance pathway
ddp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132417082 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
132417082 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddp03021
]
132417082 (SYMPK)
03019 Messenger RNA biogenesis [BR:
ddp03019
]
132417082 (SYMPK)
Transcription machinery [BR:
ddp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132417082 (SYMPK)
Messenger RNA biogenesis [BR:
ddp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
132417082 (SYMPK)
U7-dependent histone pre-mRNA processing factors
132417082 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
132417082
NCBI-ProteinID:
XP_059856674
LinkDB
All DBs
Position
20:9629722..9665541
Genome browser
AA seq
1275 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSATSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNTYLAAGAAGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSSKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPETKEAPAGPLEEDDLEPLALAPPPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSLSSSSARPGPPQPEEAIDFREEGPECE
TPAIFISMDDDSGLTEAALLDSSLEGPLPKEAAAGGLISKEERSPQTLTLAGEDTVKTPS
PTAEEAGEPETKGNS
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcagtggggacagcgtcactcgccggagcgtggcatcacagtttttcaca
caagaggaggggccgggcattgatggcatgaccacatcagagagagtggtggatctcctc
aaccaggcagcactgatcaccaatgattcaaagatcacagtgctcaaacaggtccaggag
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc
caagcagacaagtccattgaagtgcgcaagtttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttactgctgaaactgatcgcgaatctcaacatgctcttgagagat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagcgagctccaggaagcctgctgggatatg
gtgtctgccatggctggggacatcatcctcctgttggactctgacaatgacggcatccgt
acccacgccatcaagtttgtggagggcctcattgtcaccctgtcaccccgcatggccgac
tcggaggtgccccgacgccaggagcacgacatcagcctggaccgcatccctcgtgaccat
ccctatatccaatacaatgtgctgtgggaagaaggcaaggcagccttagagcagttgctc
aagttcatggtgcaccccgctatctcctccatcaacctgaccacagccctgggctccctc
gccaatattgcccgccagaggcccatgttcatgtctgaggtgattcaggcctatgaaacc
ctgcacgccaacctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaac
ctcaagttgcacctgttgagtgtgctgaagcacccagcctccttggagttccaggctcag
atcaccaccctgctggtagacctgggcacacctcaggctgagatcgcccgcaacatgccc
agtggcaaggatgcccgcaagcggccccgagacgactcagattccacactcaagaagatg
aagcttgagcccaacctgggggaagacgacgaggacaaggacttggagccaggcccctca
gcgacctcgaaggcctcagcccagatctcaggccagtcagacacagatatcacagccgag
ttcctacagcctctgctgacacctgacaatgtggccaatctggtcctcatcagcatggtg
tacctgcctgaggccatgcccgcctccttccaagccatctacaccccagtggagtcagca
ggcactgaagcccaaatcaagcacctggctcggctcatggccacacagatgacggccgca
ggactggggccaggcgtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagcctgagagtgtcctgatcaagcggcgcctgtcagctcagggtcaggccatc
tcggtagtgggctccctgagctccatgtccactctggaggaggaagcgccccaggccaag
aggaggccagagcccatcatccccgtcacgcagccccggctggcaggcgccggcgggcgc
aagaaaatcttccgtctgagtgatgtgctgaagcccctgaccgacgcccaggttgaggcc
atgaagctgggcgctgtgaagcggatcctgcgggctgagaaggccgtggcctgcagcggg
gcagcccaggtgcgcataaagatcctggccagcctggtgactcagttcgactcgggcctg
aaggccgaggtcctgtccttcatcctggaagatgtgcgggcccgcctggacctggccttt
gcctggctctaccaggagtacaacacctacctagcagctggtgccgcgggcaccctggac
aagtatgaggactgcctcatccgcctgctctccggccttcaggagaagccagaccagaag
gatgggatcttcaccaaggttgtactggaggcgccgctgatcactgagagtgccctggag
gtgattcgcaagtactgtgaggatgagagtcgcacctacctgggcatgtccactcttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc
agctcccatgagaaggacaaggtgcgttcccaggccttgctattcatcaagcgcatgtac
gagaaggaacagctacgagagtatgtggagaagtttgccctcaactacctacagctcttg
gtccaccccaacccaccgtctgtgctctttggagccgacaaggacacagaggtggcagcg
ccctggactgaggagacagtaaagcagtgtttgtacctctacctggccctcctgcctcag
aaccacaagctgatccatgagctggcagccgtgtacactgaggccatcgctgacatcaag
aggacagtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcgcccgag
ctgctcctgctggtggaaaactgtcccaagggggcagagacactggtcacacgttgtctg
cacagcctcacggacaaagtcccaccctccccagagctggtgaagcgggtccgggatctc
taccacaagcgactgcccgacgtccgcttcctcatccctgtgctcaatgggctggaaaag
aaggaagtgatccaggccctgccaaagctcatcaaactcaaccccatagtggtgaaggag
gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcagccttgtcccccctg
aaccctggagagcttctcatcgcattacacaacatcgactcctcaaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagtcccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctt
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagctcccaccccagcag
ctgggtgccgtctttgacaagtgcccggagctccgggagcccctgctggcccacgtccgt
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agcggcaagcaagagccagagactaaggaagcacctgccgggcccctggaagaggatgac
ttagagcccctggccctggcaccgcccccggccccccgcccccctcaagacctcatcggc
ctgcggctggcccaggagaaggccttaaagcggcagctggaggaggaacagaagctgaag
cctgggggagtgggagccccctcctcgtcctcctcgtcgttgtcctcttcctcggcccgg
ccaggccctccccagccggaggaagccattgatttccgggaggaggggcctgagtgtgag
accccggccatcttcatcagcatggatgatgactcggggctgactgaagctgcgctgctg
gactctagtcttgagggacccctacctaaggaagctgcagcgggcggattgatttcaaag
gaagagcggagcccccagaccctcacccttgccggagaagacaccgtgaagactcccagc
cccactgctgaggaagccggggaacccgagaccaaggggaacagctga
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integrated database retrieval system
