Delphinus delphis (saddleback dolphin): 132417293
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Entry
132417293 CDS
T11117
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132417293 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddp03019
]
132417293 (EDC4)
Messenger RNA biogenesis [BR:
ddp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132417293 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
132417293 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
DUF445
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
132417293
NCBI-ProteinID:
XP_059856967
LinkDB
All DBs
Position
20:40833715..40845154
Genome browser
AA seq
1430 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSSDGT
STNKPGLRAMPPINLQEKQVICLLGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVDVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVVPLPTHP
AHEDFAFGESRPELASEGLGSATHGSQSDLRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSTSLQQIAASPSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQLDGGL
TISSSSSLQASPRSLLPGLLPSPADKLPPKGPGQVPTAASTLSLELQEVEPLGLPQASPS
RTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLSPRPRP
GPELGPQLSLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSSLAESP
RNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGTKVPTPRLP
AKDWKTKGSPRASPKLKRKGKKDDGDSSVGSRLTEHQVAEAPEDWPALIWQQQRELAQLR
HSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQERILVGSGTAWGGSSILGPGRDMGP
AAALFLSYNAERRLERALAEGQQRGGQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTV
PPCVSRSLEPVAGQLSNSVATKLTAVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQ
AAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVL
AQLRGLVSTLQGATEQMAATVSSSVRAEVQHQLHVAVGSLQEAILAQVQRIVKGEVSVAL
KEQQAAVTSSIMQAMRSAAGTPVPTTHLDCQAQQAHILQLLQQGHLNQAFQQALTAADLN
LVLYVCETVDPGQVFGQPPCPLSQPVLLSLIQQLASDLGTRTDLKLSYLEEAVMHLDHSD
PITRDHMGSVMAQVRQKLFQFLQAEPHNSLGKAARRLSLMLHGLMTPSLP
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgtgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcgaccatctaatgcc
tacaatggagatctcaatgggctcctggtcccagaccccctctgctcaagtgatggtact
tcaacaaacaagcctggtctccgagccatgcctcctattaacctgcaggaaaagcaggtc
atctgcctcttaggagacgacagttccacctgcatcggaattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcgagcaaggcacgggggagcaacaaggtgaaa
atccagcccgtcgccaagtatgactgggagcagaaatactactatggcaacctgattgct
gtgtccaactctttcttggcctatgctattcgggctgccaacaacggctcagcgatggta
cgggtgatcagtgtcagcacttcagagaggaccctgctcaaaggcttcacaggcagtgtg
gctgatctggcctttgcacacctcaattccccacagctggcctgcctggatgaggcaggc
aacctgtttgtgtggcgcttggccctggttaatggcaaaattcaagaagagatcttggtc
catatccgacagccagagggcactccactgaatcacttccgcaggatcatctggtgcccc
ttcatccccgaagagagtgaggactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtgtgggacctggacatgctccgctccaaccacagcacctgg
cccgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccacagcacatgc
ctaagtgaaggggccctctcacctgatgggactgtcctggctaccgcaagtcatgatggc
ttcgtcaagttctggcagatttacattgaggggcaggatgagccaaggtgtttgcacgag
tggaagcctcacgatgggaggcccctctcctgcctcctgttctgtgacaaccacaagaaa
caggatcctgaggtccccttctggaggttccttattactggtgctgaccagaatcgggag
ctgaagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagctcagtgagtgtgcccccaagcctcaaggtttgcctggacctctcagcagaa
tacctgattctcagcgatgtgcaacggaaggtcctctacgtgatggaactgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcctgctcacccaccctgtg
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcca
gccgaggaggagaatgacagcctaggggctgatgggacccacggagctggtgccatggag
tctgcagctggtgtgctcatcaagctcttttgtgtgcacactaaggcattgcaagatgta
cagatccgcttccagccacagctgaaccctgacgtggtggtcccgctccctacacaccct
gcccatgaggactttgcatttggagagtctcgaccagaactggcttctgagggcctggga
tcggccactcacggctcccagtctgacctccgacgcatcgtggagctgcctgcacctgcc
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatg
acacctagcacctccctgcagcagatcgctgcatctcccagtagcagcagcagcagcagc
agcagttcctctcttacggcggtgtctgccatgagcagtacttcggccgtggacccctcc
ttgcccaggccacctgaggagctgaccttgagccccaagctacagctggatggcggtctg
acaataagcagcagtagcagcctgcaggcaagcccacgtagcctcctgcctggcctgctc
ccaagtccggccgacaaattgcctcccaaagggcctgggcaggtgcctactgctgcctct
acactatccctggagctgcaggaagtggagcccctggggctaccccaggcgtcccccagc
cgcacccgctcccccgatgttatctcctcggcttccactgccctgtcccaggatatccct
gagatcgcatctgaggcgctgtcccgtggctttggctcctccgctccggagggcctggag
ccagacagtatggcctcagctgcttcagcactacacctgctgtctccacggccccggccg
ggacccgagcttggcccccagcttagcctggatggaggccctggggatggggatcggcat
agtaccccttccctcctggaggcagccttgacccaggaggccacggcccctgacagtcag
gtctggcctacggcaccagacattactcgtgagacctgcagcagcctggcagagagcccc
cggaatggcctccaggaaaagcacaagagcctggcctttcaccgaccaccttatcacctg
ctacagcaacacgacagtcaggacgccagtgccgagcaaagcgaccatgatgatgaggtg
gccagcctggcctctgctgcagggggttttggcaccaaagttcccactccacgtcttcct
gccaaggactggaagaccaaaggatcccctcgggcctcacccaagctcaagcgaaagggc
aaaaaggatgacggggattcgtccgtgggatcccggctcacagagcaccaggtggcagag
gcccctgaggactggccagcactaatttggcaacagcagagagagctggcgcagcttcga
cacagccaagaagagctgctacagcgtctgtgcacccaacttgaaggcctgcagagcacc
gtcacgggccacgtagaacgtgccctagagtcacggcacgagcaggagcgtatccttgtg
ggcagtggcacagcatggggcggcagcagcattcttggcccaggaagggatatgggacct
gctgcagccctgttccttagctacaatgcagagcggcgactggagcgggcactggccgag
ggacagcagcgtggtgggcagctgcaggagcagctgacgcaacagctgtcccaagcgcta
tcttcagctgtggctgggcggctggagcgcagcatacgggatgagatcaagaagacggtt
cctccatgtgtgtctaggagtctggagcccgtggcaggccaactgagcaactcagtggcc
accaagctcacagccgtggagggtagcatgaaagagaatatctccaagctgctgaagtcc
aagaacttaacagatgccattgcccgagcagccgcagacacgttacaggggccaatgcag
gccgcctaccgtgaagccttccagagcgtggtactgcccgcctttgagaagagctgccag
gccatgttccagcagatcaatgatagcttccgactgggcacgcaggaatacttgcagcag
ctggagagccacatgaagagccgaaaggcacgagaacaggaggcgcgggagcccgtgctg
gcccagctgcggggcctggtcagcacgctgcagggagccacggagcagatggcggctacc
gtgtccagcagcgttcgggctgaggtgcagcaccagctgcacgtggctgtgggcagcctg
caagaggcaattttagcacaggtgcagcgcattgttaagggtgaggtgagtgtggcactc
aaggagcagcaggctgccgtcacctctagcatcatgcaggccatgcgctcagctgctggc
acacctgtccctaccacccacctcgactgccaagcccagcaagcccatatcctgcagctg
ctgcagcagggccacctcaaccaggccttccagcaggccctgacagctgccgacctgaac
ctggtgctgtacgtgtgtgaaactgtagacccaggccaggtgtttgggcagccaccttgc
cccctctcccagcctgtactcctttcactcatccagcaactggcctctgaccttggcact
cgaactgacctcaagctcagctacctggaagaggctgtgatgcacctggaccacagtgac
cccatcactcgggaccacatgggctccgtcatggcccaggtgcgccagaagctcttccag
ttcctgcaggcggagccacacaactcacttggcaaagcggcccggcgtctcagcctcatg
ctgcacggccttatgacccccagcctcccttag
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