Delphinus delphis (saddleback dolphin): 132417474
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Entry
132417474 CDS
T11117
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03410
Base excision repair
ddp05166
Human T-cell leukemia virus 1 infection
ddp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132417474 (POLB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
132417474 (POLB)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
132417474 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddp03400
]
132417474 (POLB)
Enzymes [BR:
ddp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132417474 (POLB)
DNA repair and recombination proteins [BR:
ddp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
132417474 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
132417474 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
HHH
Cdd1
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
132417474
NCBI-ProteinID:
XP_059857054
LinkDB
All DBs
Position
21:complement(2821322..2842594)
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AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVEKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESTKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDGKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaggcgccgcaggagacgctcaacgggggcatcaccgacatgctcaca
gaactcgcaaactttgagaagaacgtgaaccaggctatccacaagtacaatgcctacaga
aaagcagcatctgtgatagcaaagtacccacacaaaataaagagtggagcagaagctaag
aaactgcctggagtaggaacaaaaattgctgaaaagattgatgagtttttagctactgga
aaattgcgtaaactggaaaagattcggcaggatgatacgagttcatccatcaatttcctg
actcgagttagtggcattggtccttctgctgcaaggaagtttgtagatgaaggaattaag
acattagaagatctcagaaaaaatgaagataaattgaaccatcatcagcgaattgggcta
aaatattttgaggactttgagaaaagaattcctcgtgaagagatgttacaaatgcaagat
attgtactaagtgaagttgaaaaagtggattctgaatacattgctacagtctgtggcagt
ttcagaagaggggcagagtccagtggcgacatggatgttcttcttacccatccaagcttt
acctctgagtcaaccaaacagccaaagctgttacatcgtgttgtggagcagttacaaaag
gtccattttattacagacactctgtcaaaaggggaaacaaagttcatgggtgtttgccag
cttcccagtaaaaatgatggaaaggaatatccacacaggagaattgatatcaggttgata
cccaaggatcagtattactgtggtgtcctctatttcactgggagtgatattttcaataag
aatatgagagctcatgccctagaaaaaggcttcacaatcaatgaatacacaatccgtccc
ttgggagtcactggagttgctggagagccgctgcccgtggatagtgagaaggacatcttt
gactacatccagtggaaataccgagaacccaaggatcgaagtgaatga
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integrated database retrieval system
