Delphinus delphis (saddleback dolphin): 132418578
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Entry
132418578 CDS
T11117
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp04613
Neutrophil extracellular trap formation
ddp05014
Amyotrophic lateral sclerosis
ddp05034
Alcoholism
ddp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
132418578 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
132418578 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132418578 (HDAC6)
09165 Substance dependence
05034 Alcoholism
132418578 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ddp01009
]
132418578 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddp03019
]
132418578 (HDAC6)
04131 Membrane trafficking [BR:
ddp04131
]
132418578 (HDAC6)
03036 Chromosome and associated proteins [BR:
ddp03036
]
132418578 (HDAC6)
Enzymes [BR:
ddp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
132418578 (HDAC6)
Protein phosphatases and associated proteins [BR:
ddp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132418578 (HDAC6)
Messenger RNA biogenesis [BR:
ddp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132418578 (HDAC6)
Membrane trafficking [BR:
ddp04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132418578 (HDAC6)
Chromosome and associated proteins [BR:
ddp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
132418578 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
LysX_preATP_grasp
Motif
Other DBs
NCBI-GeneID:
132418578
NCBI-ProteinID:
XP_059858486
LinkDB
All DBs
Position
X:complement(85211464..85230519)
Genome browser
AA seq
1149 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNPHPPAHDSSVTSVRPQTSKRGVKKGAILRSSPNLAEVKKKG
RMKKLSQAAEQDLVVGLQGLDLNREARTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHA
IKEHLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSV
YLHPNSYTCACLASGSVLRLVDAVLRAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVA
ARYAQQKHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLTASNWST
TGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVSLEFQPQLVLVAAGFDALQGDPKG
EMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPVLEFPG
APCPSAQASISCALEALEPFWEVFVRSAETLEEEDTVEGDDVEEKEAEGPWQPPELPILT
WPVLQARTGLVYDPQMMDHYNLWDNHHPETPQRIKRIMHHLEELGLAGRCLALPARPATD
AELLTCHSAEHVDRLRATEKMKTRELHREGASYDSIYICPSTFTCAQLAAGAACRLVEAV
LAGEVLNGIAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAVSGRALRILIVDWDVHHG
NGTQHIFEEDPSVLYISLHRYDHGAFFPMGDEGASSQIGQAAGTGYTVNVAWNGPRLGDA
DYLVAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGSCQVSPEGYAHLTHLLMGLANGR
IILILEGGYNLTSISESMAACTHSLLGDPPPLLTLLRPPLSGALASISETIQVHRRYWCS
LRVTKVKDKEGPSSSKLITKKAPQAANPLSAKGMTMPEGNILEAGTGKATSATSVKESTS
GQTTSETAVIEFTQDQSSETAMGGAAALNQATSEAATGDATLDQTTSEEGVGGAELIQSP
PASCTDNQTPPASPMQGATTQISPSKLTGNLRTLELDKAQEPPEEEELLGEAAGGQDMNE
SVLMHVTGDHADTDQAMFYAVTPLPWCPHLVAVCPVPEAGLDVTQPCQDCGALQENWVCL
SCYQVYCSRYINAHMLQHHEGSGHPLVLSYADLSTWCYHCQAYVHHKALLAVKNIAHQNK
FGENMLHSH
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattccaccacaaccagacagcgaaggagtaggcacaatccc
catccccccgcccacgactccagcgtcacctcggtgagaccccagacctcgaagcgaggt
gttaaaaagggtgccatactccgctccagccccaatctagcggaggtaaagaagaaaggc
agaatgaagaagcttagtcaagcagccgagcaagacctagtcgtggggctgcaagggctg
gatctgaaccgggaggccaggacactgtctggcactggcttggtgttcgatgagcagcta
aatgaattccactgcctctgggatgacagcttccctgaaggccctgagcggctccatgcc
atcaaggagcatctgatccaggagggcctcctggatcgctgtgtgtcctttcaggcccga
tttgccgaaaaggaggagctgatgttggttcacagtctagaatacattgatctgatggag
acgacccagtacatgaatgagggggaactccgtgtcctagcagatacctatgactcagtt
tatctgcatccgaactcatacacctgcgcctgcctggcctcaggctccgtcctcaggctg
gtggatgcagtcctgagggctgagatccggaatggcatggcgatcatcaggcctcctgga
caccatgcccagcacagtctcatggacgggtattgcatgttcaaccacgtggctgtggct
gcccgctatgctcaacagaagcatgacattcagagggtccttatcgtggattgggatgtg
caccacggtcaaggaacacagttcacctttgaccaagaccccagtgtcctctatttctcc
atccaccgctacgagcagggtcggttctggccccaccttacagcctccaactggtccacc
acaggttttggccaaggccagggatacaccatcaatgtgccttggaaccaggtggggatg
cgagatgccgactacatcgccgctttcctgcacgtcctgctgccagtttcccttgagttc
cagccccagctggtcctggtagctgctggatttgatgccctccaaggggaccccaagggc
gagatggccgccactccggcagggttcgcccagctaacccacctgctcatgggtctggca
ggaggcaagctgatcctctcactggagggtggctacaacctccgctccctggctgagggc
gtcagcgcctcgctccacacccttctgggagacccttgccccgtgctggagttccctggc
gccccttgcccgagtgcccaggcgtctatatcctgtgctctggaagcccttgagcccttc
tgggaggtcttcgtgagatcagctgagaccctggaggaggaggacactgtggagggggac
gatgtggaggagaaggaggcggagggaccatggcagccccctgagctcccaatcctgacg
tggccggtgctgcaggctcgcacagggctggtctatgacccacagatgatggatcactac
aacttgtgggacaaccaccaccccgagacgcctcagcgcatcaagcgtatcatgcaccac
ctggaggagttgggtcttgccgggcgctgtctcgccctgcccgcacgtccagccacggac
gctgagctgctcacctgccacagtgctgagcacgtggatcgtctgcgggccacggagaag
atgaagacccgggagctgcaccgcgagggcgccagctatgactccatctacatctgcccc
agcaccttcacctgtgcgcagctggctgctggcgccgcctgccgcctggtggaggctgtg
ctggcaggagaggttttgaatggcattgctgtggtgcgtccccccggccaccatgcagag
cgggatgccgcttgcggtttctgcttcttcaactctgtggctgtggctgctcgccatgcc
caggccgtcagtgggcgtgcgctgcggatcctgatcgtggactgggacgtccatcatggt
aatggaactcagcacatatttgaggaggaccccagcgtgctgtacatttctctgcaccgc
tatgatcatggcgccttctttcctatgggggacgagggcgccagcagccagataggtcag
gctgcaggcacgggctacaccgtcaacgtggcctggaatgggccccgcttgggtgacgcc
gactacctggttgcctggcatcgtctggtgcttcccattgcctatgagtttaacccagaa
ctggtgctggtctcagctggcttcgatgctgcccggggggacccactgggcagctgccag
gtgtcgcctgagggctatgcccacctcacccacctgctgatgggcctggccaatggccgc
attatccttatcctagagggtggttataacctgacatccatctcggagtccatggccgcc
tgcacccactccctccttggggacccgccacccctgctgaccctgctgcggcccccactg
tcaggggccctggcctcgatctccgagaccatccaagtccatcgcagatactggtgcagt
ttgcgggtcacaaaggtcaaagataaagagggaccctccagttctaagttgatcaccaag
aaggcaccccaggcagccaatcctttgtcagccaaggggatgaccatgccagaagggaac
attctggaggcaggcacagggaaggccacctcagcaacatctgtgaaagagtccacttca
ggccagactacgtcagagacagctgtgatagagttcactcaggaccagtcatcagagaca
gccatgggaggagctgctgcgctgaaccaggccacctcagaggcagccacgggggatgcc
acgctggaccagaccacctcggaggagggtgtggggggagctgagctgatccaaagccct
ccagcctcatgcactgacaatcagactcctccagcgtcacccatgcaaggagccacaacc
cagatatcccccagtaaactgactggaaatctcaggaccttggaactagacaaggcacag
gaacccccagaagaggaggagctactaggagaggcagctggaggtcaggacatgaatgag
tcagtactgatgcatgtcactggagaccatgctgacactgaccaagccatgttttacgct
gtaacaccactgccctggtgtccccatttggtggcagtatgccctgtacctgaagcaggc
ctggatgtgacccaaccttgtcaggactgtggagccctccaggagaactgggtgtgtctg
tcttgctaccaggtctactgcagtcgttacatcaatgcccatatgctccaacaccatgaa
ggctcgggacacccgctggtactcagctacgccgacctgtctacctggtgttaccactgt
caggcctacgttcaccacaaggctctcctagctgtgaagaacatcgcccaccagaacaag
tttggggagaacatgctccactcacactaa
DBGET
integrated database retrieval system
