Delphinus delphis (saddleback dolphin): 132420584
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Entry
132420584 CDS
T11117
Symbol
SPG11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp04142
Lysosome
ddp05014
Amyotrophic lateral sclerosis
ddp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
132420584 (SPG11)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132420584 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
132420584 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddp03400
]
132420584 (SPG11)
DNA repair and recombination proteins [BR:
ddp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
132420584 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
132420584
NCBI-ProteinID:
XP_059861135
LinkDB
All DBs
Position
2:complement(87972165..88066935)
Genome browser
AA seq
2460 aa
AA seq
DB search
MAADKGAGSAEAVERVLPVLLVPVPAEATGRLGSRAQLHREQEVLGSLTAAGSLHVLPLA
PGGRGGGGCRLEGPFRQFVWEDSHNSGTPTDKPRLLALSENNALLICEFSLKDGRCDATI
SYSYTEETLQKLVEDQIISISLLSLRILSFHSNTSLLFINEYIILHIIFPERDAEIRVLS
CFTLSLPAQAVDRIIDTQLCRGILFVLSRLGWIYIFDTVDGRHVAHVDLALPQEDMYNEQ
QQEPAKSSSFTSLKVSQDLDVVVIVSSSNTAIALNLNLYFRQYPGHLLCERTLEDIPIEG
PKGIDEDDPVNSDYNMKLTKFSFQVDRSWKAQLSSLNETIKNSKLEGTCCAPWFQDILHL
EPPESGNHSTSVPNWAFTPQDVMCSQYSFPQKGPVKTSDSGRSWKRIHISEQEEPLELTC
MSVTGFTALFTWAVERTGCTIVLWDLETQSMQRFSLGKKCIPVDSGGDQQLCLVLTEDGL
SLILFGLTQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQLDTVDFFL
KSKENLLSPSSKSSVPDQFDHFPSHLYLKHVEELTPALDLLCSAIRENDSETQSKHFSEQ
LLNLTLSFLNKQIKELFIHNEGLDEHLQKGVNILTSYINELRTFMIKFPWKLTDAIDEYD
VNENVPKVKESNIWEKLSIEEVIANAILNNKIPEAQTFFRINSHSAQRLEELIRIGLDLV
FDNLKKNNIKEASELLKNMGFNVKDQLLKICFYTTDKNIRDFLVEILKEKNYFSEKEKRT
IDFVHQVEKFYSGHFQENMQIQSFPRYSIKEQDFFKHKSVLDSFLKYDHKDTDKLNKQDH
RIVLTWAQWWNQLTQESILLPRISPEEYKSYSPEALWRYLTARHDWFSITLWIGEFQTQN
RFASLQQNKWPPLTVDVVDQNTRCNNYMRNEILDTLARNGIFLTSELEDFELFLKRLNRI
GGVMQDTLPVQNYRSKDGWDFHCHFILYCLEHSLQYLLYVFLDYYKLSPPNCPFLEKKEL
HEAHPWFEFLVQCRQVSSNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHTLLALAT
TMYAPGGVSQVVQNEENENCVKKVDPQLLKMALTPYPKLKTALFPQYTAPSVLPPDITLY
HLIQSLLPFDPSRLFGWQSANTLTIGDAASQLPHFSSPDLVNKYAIVERLNFAYYLHHGR
PSFAFGTFLVQELTKSKTPKQLIQQVGNEAYVLGLSSFHIPSIGAACVCFLELLGLDSLK
LRVDMKVANIILSYTCRNEDAQYNFIRESLAEKLSKLAMGEKSTIEELLVLLEEGIWDSI
QQQEIKRLSSESSSQWALVVQFCRLHNLKLSTSYLRECAKANDWLQFIIHSQLHNYHPEE
VKSLLQYFSPVLQDHLRLAFENLPSVSKSRMDSDQVCNKSPQELQRNKVEMTDFFEILLQ
CSEVPNSWCWLLAEAVKQQAPILSVLASCVQDASAIPCLCVWIITSVEHSVAAEAMGHIQ
DSMEGHTWDLEDLSVIWRTLLTRQKSKTLIRGFQLFFKESPLLFMMEMYELCMFFKNYEE
AEAKLLEFQKSLETLETAATRVHAIIPAPWLKEHVYFLLKLMLQQCRTQYELGKLLQLFV
GREHLFSDGKTILTGPDVKKLCVLSQILKDTSIAINRVIITSYSLENFQHECRSILEKLE
TDGYFALARRVAELAELPVDNLIIEEITQEMQTLKHIDQWSLKQARIDFWKKCHENFKKN
SISSKAASSFFSAQALTACECPAEEGPSSTEERHLLLTLAGHWLAQEDLVPLEELEELEK
QIWLCRITQHTLRGSQEEIAPRCSQQISTSGELSFESLASEFSFSKLAALNTSKYLELNG
LPSKDTCENKLNWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNQDVALVLHCRALAS
GEASVDDLHPDIHALLQSPELLEEEEEPGVPLRKVQSTSSLDSQSFVILPPSDEVVTTLE
TLTSKCLHGKNYCRQVLCLYALAKELGCSYTDVAAQDGEAILRVILASQQPDRCKRAQAF
ISTQGLEPDTVAELVAEEVTRELLTPSEGTGHKQTFTPTEESQTFLQLTALCQDRTLVGM
KLLDKISSVPHGDLSCTTELLILAHHCFTLTCHMEGIIRVLQAARLLTDNHLAPNEEYGL
VVRLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKH
NMIALCFSMCREIGENHEAAACIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAES
YAKDSCVRQALHCHRLTKLITLQIHFLNTGQNTMLINLGRHRLMDCIMALPRFYQASIVA
EAYDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLRSSIFEEISIKCKHHQPTDLAVKNL
KKLLTYCEDVYLYYKLAYEHKFYDVVNVLLKDPQTGCCLKDMLAEHRLRMRRLSGHGSLA
NT seq
7383 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagggggctggaagcgctgaagccgtggagcgggttctacccgtgttg
ttggtgccggtccccgccgaggcaacagggcgtctgggatcccgggcgcagttgcacagg
gagcaggaggttctggggagcttgacggctgcaggcagccttcacgtgcttcccttggcg
cccggcggccggggcgggggcggctgccgcctggaaggcccttttcggcagtttgtatgg
gaggactctcataacagtgggacaccaacagacaagcccagactgcttgctcttagtgaa
aataatgcactgctcatctgtgaatttagtttgaaagatggaagatgtgatgcaaccatt
tcatatagctatactgaggagacattgcaaaagctcgttgaagatcaaattatcagtatt
tccttattatctttgagaattctgtcatttcacagtaacacatcattattgttcatcaat
gaatatatcatcctgcacattatatttcctgaaagagatgctgagattagggtactcagc
tgtttcacattatccttacctgcacaggcagtggacaggattattgacacacagctctgc
agaggaattctttttgttttgagtcgtttaggctggatctacatttttgacactgtggat
ggtagacatgtagctcatgtggatttggcacttcctcaagaagatatgtataatgagcag
caacaagagccagccaagagttcttcctttacttcattgaaagtgtctcaagacctagat
gttgtagtgattgtcagctcctccaacactgcaattgctcttaacttaaatttgtatttc
aggcaatacccaggacacctactatgtgaaagaacactagaagacattcctattgaaggc
cctaaggggatagatgaagatgatcctgttaattctgactacaacatgaaactgaccaag
ttttccttccaagttgatcggtcttggaaagcccagctgtcatcactgaatgaaacaata
aagaactccaagctggaaggtacctgttgtgctccgtggttccaggatattttgcatttg
gagccccctgaatctggtaaccacagtaccagtgtgccaaactgggccttcactccacag
gatgtaatgtgcagccagtatagttttccacagaaaggtcctgtcaagaccagtgattca
ggaagatcatggaaaagaatacacatcagtgaacaggaggaaccccttgagcttacatgt
atgtctgtgacaggcttcactgcgctgtttacttgggcagttgaaaggacgggctgtacc
attgtcctgtgggatttggagacccagagcatgcagcgtttttcgctgggcaagaagtgt
attcctgtagacagtggtggagaccagcaactgtgccttgttttgacagaagatggactc
tccctgattttgtttggtttgactcaagaggaatttttaaataggctaatgatccatgga
agtgccagcactgtggactctctttgccatctcaatggttgggggaggtgctccatcccc
atacatgcgctagaggcaggaatagaaaatcgtcagctggacacagtagatttctttttg
aagagcaaggaaaatcttttgagtccatcctcaaaatcttctgtacctgatcagtttgat
cactttccatcccatttatatttaaaacatgtggaagagctgacaccagcattggattta
ctttgctcagcaattagagaaaatgattctgaaacccagagcaaacacttttcggaacag
ttgcttaatcttacactgtctttccttaacaaacaaataaaggagctttttattcacaat
gaagggctagatgaacatctacagaaaggagtgaacattttgaccagctacattaatgaa
cttcgaaccttcatgataaagtttccttggaagctaacagatgctatagatgaatatgat
gtaaatgaaaatgtccccaaagtaaaggagagcaatatatgggagaagctcagcattgag
gaagttattgccaatgccattttaaacaacaaaataccagaggcacaaactttcttcagg
attaacagtcattctgctcaaagactcgaggagttgattagaataggcctagatttggtc
tttgacaatttgaaaaagaataatataaaggaagcctctgagcttttgaagaatatgggc
tttaatgtaaaagaccagttgctcaagatatgcttctatacaactgataaaaacatacgg
gactttttggttgaaattttaaaagaaaaaaattatttttctgaaaaagaaaaaagaact
atagacttcgtgcatcaagttgagaagttttattcaggacatttccaagaaaatatgcag
atccagtcttttcccaggtattcgataaaggaacaagattttttcaagcacaagtctgtt
ttggactcattcctgaaatatgatcataaagatacagataaacttaacaagcaagatcac
agaattgtgttaacttgggctcagtggtggaatcaactaacacaagaatccatccttctc
cccaggataagtccagaagaatacaaatcatattctcccgaagccctctggagatacctc
acagctcgccatgattggttcagcattaccttgtggattggagaatttcagacccagaat
agatttgcctcacttcagcagaacaaatggccccctctgactgtggacgttgttgatcag
aatactcgctgcaacaactacatgaggaatgaaattttagatacgctggccaggaatgga
atttttcttacatctgaactagaagactttgaactctttctcaaaagactgaaccgtatt
gggggcgtgatgcaagataccctccctgttcaaaactataggtccaaagatggttgggat
ttccattgtcacttcattctctattgtttggaacacagtctgcagtatcttctttatgtc
tttcttgactattacaaacttagtcctccaaattgtccctttttggaaaaaaaagaatta
catgaagctcacccttggtttgaatttttagtccagtgtcgacaagtttccagtaattta
acagatcccaaactgatcttccaggctagccttgcaaatgctcagatactgattcccagc
aaccaggccagtgtaagcagtatgctattggaaggacataccctcctggcccttgctacc
acaatgtatgcacctgggggcgtcagccaggttgttcagaatgaagaaaatgagaactgt
gtgaagaaagtagatccccagctactgaagatggcattaactccttaccccaagcttaaa
actgctctcttcccacagtacactgcccctagtgtcctgccaccagatattacactctac
cacctgattcagtcattattgccctttgatcctagcagattgtttggctggcagtctgcc
aacacactgactataggagatgcagcgagtcagctcccacatttctctagccctgacctg
gttaataaatatgctatagtagaacgtctgaattttgcttattatttacatcatggacga
ccatcgtttgcgtttggtacttttctggttcaggaattaaccaagagcaagacccccaag
cagctaatccagcaagtaggcaatgaagcctatgttttagggctctcctccttccacata
ccatcaataggagctgcctgtgtttgtttcttagaactgcttggcctcgacagcctgaag
ctcagagttgatatgaaagtggccaatataattttgagctacacgtgtagaaatgaagat
gctcagtacaactttatcagagagtctctagctgaaaaactatctaaactggctatgggt
gaaaagtcaaccatagaagaattgcttgttctcttagaagaaggtatatgggacagcatt
cagcagcaggaaataaagaggttatccagtgaatccagcagccagtgggcattagtggta
caattctgcaggctccacaatctgaaactgagcacatcttaccttagagaatgtgccaaa
gcaaatgattggttacagtttattattcacagccaactccataattaccacccagaggag
gtgaaatctcttctccaatatttcagccctgttcttcaagaccacttaagactggctttt
gagaacttgccctcagtgtccaagtctagaatggacagtgatcaagtctgcaacaagtcc
ccgcaggaactgcaaagaaacaaagtagagatgactgatttctttgaaattctgcttcag
tgctcagaggtgccaaactcctggtgctggctcctggcagaagcagtgaaacaacaggcc
ccaatccttagtgtcctggcctcatgtgtccaggacgccagtgctattccttgcctctgt
gtttggatcatcacttctgtggagcacagtgttgcagctgaagcaatgggacacattcag
gactcaatggagggccatacttgggaccttgaggacctctcagtcatctggaggacatta
ttaacacggcagaagagcaaaactctcatcagaggtttccagcttttctttaaggagtcc
ccattactcttcatgatggagatgtatgaactgtgtatgttcttcaagaattatgaggaa
gccgaagctaaacttctggagttccagaagagccttgaaactcttgaaacggctgccaca
agggtccacgctatcattcctgccccatggctgaaggagcatgtgtattttcttttgaag
cttatgctgcagcagtgtaggacccagtatgagctggggaagcttttacagctgtttgtt
ggaagagagcatctcttctctgatggtaagacaatacttacaggtccagatgtgaagaag
ctgtgcgtccttagccaaattttgaaggatacatccatagccattaatcgtgtaattatt
accagctacagccttgagaattttcagcatgaatgtagatcaattttagaaaaactggag
acagatggatactttgctttggccagaagggtagcagaactagctgagctacctgtggac
aacttgattattgaagagataacacaggaaatgcagaccttaaaacacattgaccagtgg
tccctgaaacaagcaagaattgacttctggaaaaaatgtcatgagaattttaagaaaaat
tccatttcaagcaaagcagcttcttcctttttctcagcccaggctcttacggcatgtgag
tgcccagctgaggagggaccaagcagcactgaggagcgccatctgctcctcactctggca
ggacactggcttgcccaggaggacctggtgcctttggaagagctggaggagctagagaag
cagatctggctctgccgcatcacccagcacaccctcaggggaagccaggaggaaatagcc
cccagatgttctcaacagatttcaactagtggtgaactttcctttgaaagcttagccagt
gagttttcattctctaagttggctgctctgaacacatcaaaatacttagaattgaatggc
cttccatccaaagacacttgtgagaacaaactgaactggaaggagcaggagtccctaaac
tttttgatcgggcgcctattggatgatggctgtgtgcatgaagcaagtagagtatgccga
tattttcatttctataaccaagatgttgccttggtgttgcactgcagagcactagcttca
ggggaagctagtgtggatgacctgcacccggacatccatgctctcttacaaagtcctgag
ctgcttgaggaagaggaagaacctggcgttcctctaaggaaagtccaaagcacttcaagt
ttggacagtcagtcatttgtgatactgccccccagtgatgaagtggtgactactctggaa
actctgacaagcaaatgcctccatgggaagaattattgccggcaggtcctctgtctctat
gcacttgccaaggagttgggctgttcctacacagatgtcgctgcccaggatggtgaggcc
attctccgggtaatcttggcctctcagcagcctgaccgatgcaagcgagctcaagccttc
atcagcacccagggcctcgagccagacacagtggctgaacttgtggctgaagaggtgacc
cgggagctgctgaccccatcagagggaacaggacataagcagacgttcaccccaacagag
gaaagccagacgtttcttcagctgactgctctgtgtcaagaccgcaccttggtaggcatg
aagttgttggataagatttcctccgttccccatggggacttgtcttgcaccacagagctg
ctgatcctggctcatcactgcttcacactgacatgccacatggagggcatcatccgagtc
ctgcaggccgcccggctgctcacagacaaccacttggcccccaatgaggagtacggactg
gtggtgcgtctcctcactggcattggaaggtacaatgagatgacatacatatttgatttg
ctgcataaaaaacactactttgaagtgctgatgaggaagaaattggacccgagtggtacc
ctgaagacggccctactggactacatcaaacgctgccgccctggggacagtgagaagcac
aacatgattgccctgtgtttcagcatgtgccgggagattggggagaaccatgaggcagct
gcctgcatccaactgaaattgattgagtctcagccctgggaggacagcctcaaggatggg
caccaactgaagcagctgctgctgaaggccctgactctgatgctggatgcagcagagagt
tatgccaaggactcctgcgtgcgacaggccctgcactgtcaccggctcaccaagttgata
acactgcagattcactttctgaacaccggccagaacacaatgctcatcaacctgggccgc
cacaggctgatggactgtatcatggccctacctcggttctaccaggcttctattgtggct
gaggcctatgactttgttcctgattgggctgaaattttataccaacaagtgattcttaaa
ggagactttaattacctggaagaatttaagcagcaaaggttattaagatccagtatattt
gaagaaatttcaataaaatgtaaacatcatcagcctactgacttagctgtgaaaaacctg
aagaagttactcacatattgtgaagacgtctacttgtattacaagctggcatacgaacac
aaattttatgacgttgtaaatgtgcttctgaaggaccctcagacaggttgctgtctaaag
gacatgctagcagagcacaggctccggatgcgcaggctcagcggccatggctcactggcc
tag
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integrated database retrieval system
