Delphinus delphis (saddleback dolphin): 132421660
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Entry
132421660 CDS
T11117
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
ddp Delphinus delphis (saddleback dolphin)
Pathway
ddp03013
Nucleocytoplasmic transport
ddp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132421660
09122 Translation
03013 Nucleocytoplasmic transport
132421660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddp03019
]
132421660
03041 Spliceosome [BR:
ddp03041
]
132421660
Messenger RNA biogenesis [BR:
ddp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132421660
Spliceosome [BR:
ddp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132421660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
MLKL_N
Motif
Other DBs
NCBI-GeneID:
132421660
NCBI-ProteinID:
XP_059862470
LinkDB
All DBs
Position
1
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AA seq
659 aa
AA seq
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MSSESSKNRKPKVIRSDGAPAEGKHNRSDTEQEGKYYSEEAEVDLWDPXRDYELYKYTCQ
ELQRLMAEIQDLRSRGDKDAAVEIEGRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAE
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSNHEEIDRVSLEEAPPDISKAEVTMGDPH
QQTLARLDWELEQRKRLVEKYRECLSNKEKILKETEVKKEYLSSLQPRLNSIMQASLPVQ
EXLFMPFDQAHKQYETARHLPPPLYVQATVYGQDKRKEMLKRHPLSVMLDLRCKDDSELH
LTFYYLMNLNIMTVKAKVTTATEVITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQYQ
FDKVGILTLRDYILDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSASHMETTMKPLKT
RAQSRLARHKWFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYTELHFTKDIVE
AGLAGDTNLYYMALVERGTAKLQAAMVLNPGYSSIPPIFQLCLNWKGEKTNNNDDNIRAV
ESEVNVCYKELCGPRPGHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLRL
FRGPSRMKPFKYNHPQGFFSHRGPPTRPVVSPQTQLLCLCFLLWRTRGSFFFFYIFIEV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaatcgagcaaaaatcgaaagcccaaagtgatccgaagtgatggagctcca
gctgaagggaagcataatcgttctgacactgaacaggaaggtaaatactacagcgaggag
gctgaggtggacctgtgggaccctngcagagactatgagctgtacaagtacacgtgccag
gagttgcagaggctcatggccgagatccaggacctgaggagcaggggagacaaggatgcg
gcagttgagatcgaaggtcggaggatccagagctgtgtgcatttcatgactctaaaaaaa
cttaaccgattagcccacatcaggttgaagaaaggaagagatcagactcatgaggccgag
cagaaagtggacgcctatcacctgcagctccagaacctgttgtatgaggtgatgcacctg
cagaaggagatcaccaaatgtctggagtttaagtcaaatcacgaagaaatcgatcgggtc
agcttagaggaggctcctccagatatcagcaaggcggaagtcaccatgggagaccctcac
cagcagacccttgcacgtctggactgggagctggagcagcggaaaaggctggtggagaag
taccgagagtgcctgtccaacaaggagaagatccttaaggagactgaagtaaagaaggag
tacctgagtagcctccagcctcgtctcaacagcatcatgcaggcttccctaccggtgcag
gagtaactgtttatgcccttcgaccaagctcacaagcagtatgagacagcccgacaccta
cctcctcccctctatgtccaggccactgtgtatgggcaagacaagcgcaaggagatgctg
aagaggcacccgctgtccgtcatgctggacctgaggtgcaaagatgacagtgaactgcac
ctgactttctactacctcatgaacctcaacatcatgacggtaaaagccaaagtgacaacc
gccacagaagtgatcacccccatcagtgcaggtgacttgctgtctcctgactcagtcctg
agctgtttgtatcctggggatcatggaaagaaaactccaaatccagccaatcagtatcag
tttgataaagttggcatcctgactttgagggactacatacttgacttagggcatccctat
ttgtgggtgcagaagctgggtggcctccacttccccaaagagcagccccagcacactgtg
atcgctgaccactctctgagcgccagccacatggagaccactatgaaaccgctgaagacc
agggcgcagtcccgcctggcccgccacaagtggtttgcctccctggaacacggcattgtg
ccagttaccagtgactgccagtacctcttccctgcaaaggttgtctctcgcctggtgaag
tgggtgacgattgcccatgaggattatacggagctgcattttaccaaagacatcgtggag
gcgggactggctggggacaccaatctctactatatggcacttgtggaaaggggcacggct
aagctccaggctgccatggtgctgaaccccggctactcctccatcccacccattttccag
ctctgtctgaactggaaaggggagaaaaccaacaacaacgacgacaatattcgggccgtg
gagagtgaggtcaatgtgtgctacaaggagctgtgcggcccccggcccggccaccagctc
ttgacgaaccagctgcagcgtctgtgtgtgctgctggacgtctacctggagacggagagc
catgatgacagcgtggaggggcccaaggaatttccccaggagaaaatgtgtctgcggctt
ttcaggggccccagcaggatgaagccgtttaaatataaccaccctcaaggattcttcagc
catcggggacctcccactcggcctgttgtttccccccagacccaactgctgtgcctctgc
tttctgctctggcgcacacgtggctcttttttttttttttacatctttattgaagtatag
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